RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 SULT1A1P50225 295 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 H2BFSP57053 126 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ACTBP60709 375 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ACTG1P63261 375 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 HBG1P69891 147 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 HBG2P69892 147 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 H3F3AP84243 136 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 FAM3AP98173 230 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 SKP2Q13309 424 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 C18orf21Q32NC0 220 aaPredicted RBP1.95□□□□□ -2.1
USP48-209ENST00000487880 CEACAM21Q3KPI0 293 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 TMEM176BQ3YBM2 270 aaPredicted RBP1.95□□□□□ -2.1
USP48-209ENST00000487880 NCMAPQ5T1S8 102 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 C1orf194Q5T5A4 169 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ZNF322Q6U7Q0 402 aaPredicted RBP1.95□□□□□ -2.1
USP48-209ENST00000487880 CLEC20AQ6ZU45 233 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 SLC25A26Q70HW3 274 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 SCXQ7RTU7 201 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 COMMD6Q7Z4G1 85 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 DEFB106AQ8N104 65 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 C10orf111Q8N326 155 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 GATD1Q8NB37 220 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 OR5D16Q8NGK9 328 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 OR4C6Q8NH72 309 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 OR4A5Q8NH83 315 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 OR2V1Q8NHB1 315 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 CD200R1Q8TD46 325 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 EEF1AKMT1Q8WVE0 214 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ASB17Q8WXJ9 295 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 MUCL1Q96DR8 90 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 SMIM12Q96EX1 92 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 S100A16Q96FQ6 103 aaKnown RBP1.95□□□□□ -2.1
USP48-209ENST00000487880 IMP4Q96G21 291 aaKnown RBP1.95□□□□□ -2.1
USP48-209ENST00000487880 ACY3Q96HD9 319 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 BTF3L4Q96K17 158 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PACRGQ96M98 296 aaPredicted RBP1.95□□□□□ -2.1
USP48-209ENST00000487880 AQP10Q96PS8 301 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 IMMP2LQ96T52 175 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PBDC1Q9BVG4 233 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 HINT2Q9BX68 163 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 SNHG12Q9BXW3 62 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 POTEKPQ9BYX7 375 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 NMES1Q9C002 83 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 RAB1BQ9H0U4 201 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ATG5Q9H1Y0 275 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 OR5AC2Q9NZP5 309 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 SLC23A2Q9UGH3 650 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 DKKL1Q9UK85 242 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 HDGFL3Q9Y3E1 203 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PUS1Q9Y606 427 aaKnown RBP eCLIP1.95□□□□□ -2.1
USP48-209ENST00000487880 TSC2P49815 1807 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PARP14Q460N5 1801 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PATJQ8NI35 1801 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ROBO1Q9Y6N7 1651 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 ANKRD36A6QL64 1941 aa1.95□□□□□ -2.1
USP48-209ENST00000487880 PDCD11Q14690 1871 aaKnown RBP1.94□□□□□ -2.1
USP48-209ENST00000487880 YLPM1P49750 1951 aaKnown RBP1.94□□□□□ -2.1
USP48-209ENST00000487880 ALPK3Q96L96 1907 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 C20orf202A1L168 122 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 FAM183AA6NL82 134 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 E7EQ34 232 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 F5H5T6 163 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 BHLHE40O14503 412 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST1H2BKO60814 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 CST4P01036 141 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 IFNA21P01568 189 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 PMP2P02689 132 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST1H2BJP06899 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 CST2P09228 141 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 CTXN2P0C2S0 81 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 GZMBP10144 247 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 SCGB1A1P11684 91 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 ATF1P18846 271 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST1H2BOP23527 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 NFYBP25208 207 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 G0S2P27469 103 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST1H2BBP33778 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 SNCAP37840 140 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 CAV3P56539 151 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 NDUFA6P56556 154 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST1H2BDP58876 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST1H2BCP62807 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 CDK6Q00534 326 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 PSG4Q00888 419 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 PRDX1Q06830 199 aaKnown RBP1.94□□□□□ -2.1
USP48-209ENST00000487880 FOXF1Q12946 379 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 PSG3Q16557 428 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 GUK1Q16774 197 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST2H2BEQ16778 126 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 SCGB2B2Q4G0G5 96 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 MORN2Q502X0 79 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 ACSM3Q53FZ2 586 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 KHDC3LQ587J8 217 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.94□□□□□ -2.1
USP48-209ENST00000487880 COL5A1-AS1Q5SY13 56 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 TNFAIP8L2Q6P589 184 aaPredicted RBP1.94□□□□□ -2.1
USP48-209ENST00000487880 SCIMPQ6UWF3 145 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 SBSNQ6UWP8 590 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 SSX7Q7RTT5 188 aa1.94□□□□□ -2.1
USP48-209ENST00000487880 SLC35E3Q7Z769 313 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms