RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 CRB1P82279 1406 aa1.64□□□□□ -2.15
LAPTM4A-202ENST00000483117 MYH3P11055 1940 aa1.64□□□□□ -2.15
LAPTM4A-202ENST00000483117 MYH2Q9UKX2 1941 aa1.64□□□□□ -2.15
LAPTM4A-202ENST00000483117 PLA2R1Q13018 1463 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 MRC2Q9UBG0 1479 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 TRIP11Q15643 1979 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 CHD5Q8TDI0 1954 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 HECW1Q76N89 1606 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 RTL9Q8NET4 1388 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 KIF26AQ9ULI4 1882 aaPredicted RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 DOCK3Q8IZD9 2030 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 UBR2Q8IWV8 1755 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 IGKV1D-37A0A075B6S9 117 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 MEIKINA0A087WXM9 373 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 A0A1B0GU33 70 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 A0A1B0GV90 55 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 LINC00587B1AMM8 73 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 C3orf84H3BNL1 204 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 J3QQQ9 107 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 TMEM256-PLSCR3K7ERE1 68 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 NDUFB3O43676 98 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 OR2T1O43869 369 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 PAEPP09466 180 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 CCL5P13501 91 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 HLA-EP13747 358 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 INSL3P51460 131 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 FXYD2P54710 66 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 RRAS2P62070 204 aaPredicted RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 HBBP68871 147 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 HIST1H1AQ02539 215 aaPredicted RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 SLC38A11Q08AI6 406 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 AMMECR1LQ6DCA0 310 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 EIF5AL1Q6IS14 154 aaKnown RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 ZNF880Q6PDB4 577 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 LYZL1Q6UWQ5 148 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 LINC00305Q7Z4B0 112 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 PACRGLQ8N7B6 248 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 SIGLECL1Q8N7X8 197 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 OR5A2Q8NGI9 324 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 PFN4Q8NHR9 129 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 CARD19Q96LW7 228 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 AP1S3Q96PC3 154 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 GGACTQ9BVM4 153 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 SMIM3Q9BZL3 60 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 OTORQ9NRC9 128 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 OR5AC2Q9NZP5 309 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 NAT8Q9UHE5 227 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 HS3ST2Q9Y278 367 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 RBM7Q9Y580 266 aaKnown RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 TIMM9Q9Y5J7 89 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 PIK3C2AO00443 1686 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 KDM6AO15550 1401 aaPredicted RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 RIC1Q4ADV7 1423 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 TNS3Q68CZ2 1445 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 BRWD3Q6RI45 1802 aa1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 MED1Q15648 1581 aaPredicted RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 TCOF1Q13428 1488 aaKnown RBP1.63□□□□□ -2.15
LAPTM4A-202ENST00000483117 TICRRQ7Z2Z1 1910 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 NUP214P35658 2090 aaPredicted RBP1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 DSCAML1Q8TD84 2053 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 IGLV4-60A0A075B6I1 120 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 TRGV5A0A0B4J1U4 118 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 TRAV13-1A0A0B4J241 112 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 IGKV1-9A0A0C4DH69 117 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 LOC107984640A0A0U1RRK4 108 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 C19orf71A6NCJ1 209 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 C16orf90A8MZG2 172 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 GGTLC3B5MD39 225 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 SDCBPO00560 298 aaPredicted RBP1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 GPX1P07203 203 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 FABP2P12104 132 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 RNASE4P34096 147 aaKnown RBP1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 RPL22P35268 128 aaKnown RBP1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 DNLZQ5SXM8 178 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 C4orf22Q6V702 233 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 DPPA3Q6W0C5 159 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 DEFB128Q7Z7B8 93 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 BPIFA4PQ86YQ2 179 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 PDZD9Q8IXQ8 264 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 LYPD1Q8N2G4 141 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 Q8NAQ8 132 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 DCANP1Q8TF63 244 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 TP53RKQ96S44 253 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 HIGD2AQ9BW72 106 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 TTTY13Q9BZ97 58 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 LINC00470Q9BZP3 86 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 CBLN4Q9NTU7 201 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 NAIPQ13075 1403 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 RALGAPA2Q2PPJ7 1873 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 COL18A1P39060 1754 aa1.62□□□□□ -2.15
LAPTM4A-202ENST00000483117 COL1A2P08123 1366 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 CCNB3Q8WWL7 1395 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 TMEM2Q9UHN6 1383 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 PTPRGP23470 1445 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 PRG4Q92954 1404 aaPredicted RBP1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 TRBV27A0A0K0K1C4 114 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 C17orf98A8MV24 154 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 A8MWV9 139 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 H3BMG7 143 aa1.61□□□□□ -2.15
LAPTM4A-202ENST00000483117 SYNGR2O43760 224 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms