RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 THBDP07204 575 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 CKS1BP61024 79 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 DEPPQ9NTK1 212 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
MCF2L-225ENST00000480321 MYOFQ9NZM1 2061 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 TRAV12-3A0A0B4J271 114 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 IGKV3D-20A0A0C4DH25 116 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 A6NNC1 897 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 OR2K2Q8NGT1 345 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 TRGV9Q99603 122 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 NSUN5P1Q3KNT7 163 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 C3orf36Q3SXR2 165 aa11.27□□□□□ -0.61
MCF2L-225ENST00000480321 IGHV1-18A0A0C4DH31 117 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 LDLRAD2Q5SZI1 272 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 SPACA3Q8IXA5 215 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 PNRC2Q9NPJ4 139 aaKnown RBP11.26□□□□□ -0.61
MCF2L-225ENST00000480321 NDUFS8O00217 210 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 TRAV8-4A0A0B4J246 113 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 TRGV11A0A075B6L2 103 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 C17orf82Q86X59 251 aaPredicted RBP11.26□□□□□ -0.61
MCF2L-225ENST00000480321 STHQ8IWL8 128 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 RNF182Q8N6D2 247 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 PAX2Q02962 417 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 FAM71F2Q6NXP2 309 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 GGNQ86UU5 652 aa11.26□□□□□ -0.61
MCF2L-225ENST00000480321 FOXL2NBQ6ZUU3 175 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 ZCCHC24Q8N2G6 241 aaKnown RBP11.25□□□□□ -0.61
MCF2L-225ENST00000480321 SSC4DQ8WTU2 575 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 OOSP1A8MZH6 123 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 PLNP26678 52 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
MCF2L-225ENST00000480321 METRNQ9UJH8 293 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 SPTBP11277 2137 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 E9PLN8 166 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 LYNX1G3V0Z9 82 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 EFNA2O43921 213 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 LYNX1P0DP58 116 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 VKORC1Q9BQB6 163 aa11.25□□□□□ -0.61
MCF2L-225ENST00000480321 NTN3O00634 580 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-225ENST00000480321 CLPSP04118 112 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 LYPD1Q8N2G4 141 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 FOXF2Q12947 444 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 ASCL4Q6XD76 172 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 MGST2Q99735 147 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 SPRR3Q9UBC9 169 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 IL18BPO95998 194 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 IGKV1-5P01602 117 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 CD24P25063 80 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 TMEM167AQ8TBQ9 72 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 SLC25A39Q9BZJ4 359 aaPredicted RBP11.24□□□□□ -0.61
MCF2L-225ENST00000480321 SIP14410 1827 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 DOCK3Q8IZD9 2030 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 CRPP02741 224 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 LAGE3Q14657 143 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 ZNF479Q96JC4 524 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 ABCA1O95477 2261 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 BRWD3Q6RI45 1802 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 WDR90Q96KV7 1748 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 SAMD5Q5TGI4 173 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 RPRMLQ8N4K4 120 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 FGFBP3Q8TAT2 258 aa11.24□□□□□ -0.61
MCF2L-225ENST00000480321 A8MWV9 139 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 GZMBP10144 247 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 DLEU1O43261 78 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 GLMPQ8WWB7 406 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 GREB1Q4ZG55 1949 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 IGHV1-46P01743 117 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 CD7P09564 240 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 PLSCR4Q9NRQ2 329 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 MBNL3Q9NUK0 354 aaKnown RBP11.23□□□□□ -0.61
MCF2L-225ENST00000480321 SLC25A20O43772 301 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 RHOGP84095 191 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 GFI1BQ5VTD9 330 aa11.23□□□□□ -0.61
MCF2L-225ENST00000480321 PINLYPA6NC86 204 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 KIR3DL3Q8N743 410 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.22□□□□□ -0.61
MCF2L-225ENST00000480321 TFF1P04155 84 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 TCRAP04437 139 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 A0A1B0GWJ7 208 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 CD59P13987 128 aa11.22□□□□□ -0.61
MCF2L-225ENST00000480321 SPTBN2O15020 2390 aa11.21□□□□□ -0.61
MCF2L-225ENST00000480321 GFRA4Q9GZZ7 299 aa11.21□□□□□ -0.61
MCF2L-225ENST00000480321 TRAV40A0A0B4J280 105 aa11.21□□□□□ -0.61
MCF2L-225ENST00000480321 SRSF8Q9BRL6 282 aaKnown RBP11.21□□□□□ -0.62
MCF2L-225ENST00000480321 TMEM238C9JI98 176 aa11.21□□□□□ -0.62
MCF2L-225ENST00000480321 ITGB1BP1O14713 200 aa11.21□□□□□ -0.62
MCF2L-225ENST00000480321 TRAV2A0A0B4J234 112 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 TRGV4A0A0C4DH28 118 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 ESPL1Q14674 2120 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 CACNA1IQ9P0X4 2223 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 MINOS1Q5TGZ0 78 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 GTSCR1Q86UQ5 136 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 MINOS1-NBL1R4GNA1 71 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 XIRP1Q702N8 1843 aaKnown RBP11.2□□□□□ -0.62
MCF2L-225ENST00000480321 Q6P435 159 aa11.2□□□□□ -0.62
MCF2L-225ENST00000480321 SPSB3Q6PJ21 355 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms