RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 DEFB123Q8N688 67 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 SREK1IP1Q8N9Q2 155 aaPredicted RBP-1.2□□□□□ -2.6
CALD1-218ENST00000478075 OR4K17Q8NGC6 315 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 DTD1Q8TEA8 209 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 CIDECQ96AQ7 238 aaPredicted RBP-1.2□□□□□ -2.6
CALD1-218ENST00000478075 RAB37Q96AX2 223 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 C8orf44Q96CB5 159 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 ACY3Q96HD9 319 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 PACRGQ96M98 296 aaPredicted RBP-1.2□□□□□ -2.6
CALD1-218ENST00000478075 CATSPER2Q96P56 530 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 ANP32EQ9BTT0 268 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 SUCNR1Q9BXA5 334 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 COA1Q9GZY4 146 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 OR52A5Q9H2C5 316 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 NAA60Q9H7X0 242 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 TREM1Q9NP99 234 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 SCN3BQ9NY72 215 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 COA4Q9NYJ1 87 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 EMC3Q9P0I2 261 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 SLC22A13Q9Y226 551 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 PRELID1Q9Y255 219 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 CEP290O15078 2479 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 KIAA0556O60303 1618 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 CICQ96RK0 1608 aaPredicted RBP-1.2□□□□□ -2.6
CALD1-218ENST00000478075 TRRAPQ9Y4A5 3859 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 ARAP1Q96P48 1450 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 HMGXB3Q12766 1538 aa-1.2□□□□□ -2.6
CALD1-218ENST00000478075 DNAH8Q96JB1 4490 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 RAB3GAP2Q9H2M9 1393 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 LRBAP50851 2863 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 PAPPA2Q9BXP8 1791 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 WNK3Q9BYP7 1800 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 ARFGEF1Q9Y6D6 1849 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TRAV12-2A0A075B6T6 113 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TRAV26-1A0A087WT03 109 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 A0A096LPI6 279 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 DUXBA0A1W2PPF3 345 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 SNTNA6NMZ2 147 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 LRRN3E7EW58 273 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 SYS1-DBNDD2H3BUS1 97 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 M0R2P5 195 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 DFFAO00273 331 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 AZIN1O14977 448 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 PIN1P1O15428 100 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 PRPSAP2O60256 369 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 SNAP29O95721 258 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TSPAN12O95859 305 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 CST1P01037 141 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 GP1BAP07359 652 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 FGF6P10767 208 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 ATP6V1C1P21283 382 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 DEKP35659 375 aaKnown RBP-1.21□□□□□ -2.6
CALD1-218ENST00000478075 UGT2B10P36537 528 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 CRYBB2P43320 205 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 GCLMP48507 274 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 SULT1A1P50225 295 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TMEM33P57088 247 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TAS2R39P59534 338 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 UBE2D3P61077 147 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 UBE2D2P62837 147 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 MIR22HGQ0VDD5 57 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TAF1AQ15573 450 aaPredicted RBP-1.21□□□□□ -2.6
CALD1-218ENST00000478075 NEDD8Q15843 81 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 C5orf64Q2M2E5 130 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 CENPWQ5EE01 88 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TPRG1LQ5T0D9 272 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 C1orf134Q5TEV5 83 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 CLPSL2Q6UWE3 100 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 ARPINQ7Z6K5 226 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 DEFB125Q8N687 156 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TMEM229BQ8NBD8 167 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 ITFG1Q8TB96 612 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 SLC37A2Q8TED4 501 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 DNAJC9Q8WXX5 260 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 H1FXQ92522 213 aaKnown RBP-1.21□□□□□ -2.6
CALD1-218ENST00000478075 LRRC45Q96CN5 670 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 MS4A6EQ96DS6 147 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 IMP4Q96G21 291 aaKnown RBP-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TMEM141Q96I45 108 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 DERL2Q9GZP9 239 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 NAA50Q9GZZ1 169 aaKnown RBP-1.21□□□□□ -2.6
CALD1-218ENST00000478075 SLC22A4Q9H015 551 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 RAB1BQ9H0U4 201 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 C1orf21Q9H246 121 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 BCL2L10Q9HD36 194 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 C6orf50Q9HD87 102 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 TMEM216Q9P0N5 145 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 RABL2AQ9UBK7 228 aaPredicted RBP-1.21□□□□□ -2.6
CALD1-218ENST00000478075 CDC42BPAQ5VT25 1732 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 KANK1Q14678 1352 aa-1.21□□□□□ -2.6
CALD1-218ENST00000478075 RIMBP3CA6NJZ7 1639 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 RIMBP3BA6NNM3 1639 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 RIMBP3Q9UFD9 1639 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 IFT172Q9UG01 1749 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 TRBV7-1A0A0A6YYK4 115 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 C1orf232A0A0U1RR37 186 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 A0A1B0GW54 56 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 ANKRD20A5PA0PJZ0 165 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 OR4C46A6NHA9 309 aa-1.22□□□□□ -2.6
CALD1-218ENST00000478075 CPSF4LA6NMK7 179 aaKnown RBP-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms