RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 DOCK4Q8N1I0 1966 aa0.97□□□□□ -2.25
SSB-209ENST00000470621 FHAD1B1AJZ9 1412 aa0.97□□□□□ -2.25
SSB-209ENST00000470621 NUP160Q12769 1436 aa0.97□□□□□ -2.25
SSB-209ENST00000470621 CPDO75976 1380 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 KIF24Q5T7B8 1368 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 ECM29Q5VYK3 1845 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 TOPBP1Q92547 1522 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 TECTAO75443 2155 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 FABP5P3A8MUU1 101 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 C1orf196B1AJZ1 125 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 H7C1C5 153 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 H7C2G1 150 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 J3QRK9 145 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 IFNA14P01570 189 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 RPS4Y1P22090 263 aaKnown RBP0.96□□□□□ -2.26
SSB-209ENST00000470621 RPS3P23396 243 aaKnown RBP eCLIP0.96□□□□□ -2.26
SSB-209ENST00000470621 TCTAP57738 103 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 TPI1P60174 286 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 LCN6P62502 163 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 FAM27BQ5VT28 67 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 RPL22L1Q6P5R6 122 aaKnown RBP0.96□□□□□ -2.26
SSB-209ENST00000470621 HRCT1Q6UXD1 115 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 CLVS1Q8IUQ0 354 aaPredicted RBP0.96□□□□□ -2.26
SSB-209ENST00000470621 C9orf163Q8N9P6 203 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 PFN4Q8NHR9 129 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 PYDC1Q8WXC3 89 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 GPX7Q96SL4 187 aaPredicted RBP0.96□□□□□ -2.26
SSB-209ENST00000470621 ADAT1Q9BUB4 502 aaKnown RBP0.96□□□□□ -2.26
SSB-209ENST00000470621 XAGE1AQ9HD64 81 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 NAT8Q9UHE5 227 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 OR52A1Q9UKL2 312 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 PCTPQ9UKL6 214 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 SSR3Q9UNL2 185 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 GINS2Q9Y248 185 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 ASB4Q9Y574 426 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 TENM3Q9P273 2699 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 TECPR2O15040 1411 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 STRCQ7RTU9 1775 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 TONSLQ96HA7 1378 aa0.96□□□□□ -2.26
SSB-209ENST00000470621 BRWD1Q9NSI6 2320 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 NUP210LQ5VU65 1888 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 TRAV7A0A075B6U4 112 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 MEIKINA0A087WXM9 373 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 TRAV38-1A0A0B4J264 116 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 A0A0J9YW62 118 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 F8W036 122 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 TAX1BP3O14907 124 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 BANF1O75531 89 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 PPBPP02775 128 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 MSNP26038 577 aaKnown RBP0.95□□□□□ -2.26
SSB-209ENST00000470621 FKBP2P26885 142 aaKnown RBP0.95□□□□□ -2.26
SSB-209ENST00000470621 PLCXD2Q0VAA5 305 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 RRN3P1Q2M238 152 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 TMEM128Q5BJH2 165 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 BPIFA4PQ86YQ2 179 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 C2orf50Q96LR7 162 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 EFCAB11Q9BUY7 163 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 ERGIC3Q9Y282 383 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 RNF11Q9Y3C5 154 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 FMN1Q68DA7 1419 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 YTHDC2Q9H6S0 1430 aaKnown RBP0.95□□□□□ -2.26
SSB-209ENST00000470621 MED1Q15648 1581 aaPredicted RBP0.95□□□□□ -2.26
SSB-209ENST00000470621 ARHGEF28Q8N1W1 1705 aaKnown RBP0.95□□□□□ -2.26
SSB-209ENST00000470621 ARHGEF10O15013 1369 aa0.95□□□□□ -2.26
SSB-209ENST00000470621 XIRP1Q702N8 1843 aaKnown RBP0.94□□□□□ -2.26
SSB-209ENST00000470621 SCAF11Q99590 1463 aaKnown RBP0.94□□□□□ -2.26
SSB-209ENST00000470621 ZCCHC11Q5TAX3 1644 aaKnown RBP0.94□□□□□ -2.26
SSB-209ENST00000470621 ODAMA1E959 279 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 RIIAD1A6NNX1 92 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 TMEM256-PLSCR3K7ERE1 68 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 NDUFC2O95298 119 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 IFNA7P01567 189 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 MSMBP08118 114 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 CRYGAP11844 174 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 S100GP29377 79 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 CASP1P29466 404 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 POLR2HP52434 150 aaKnown RBP0.94□□□□□ -2.26
SSB-209ENST00000470621 FKBP1CQ5VVH2 108 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 MIR17HGQ75NE6 70 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 Q8N2B8 174 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 TMEM86AQ8N2M4 240 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 FAM24BQ8N5W8 94 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 SIGLECL1Q8N7X8 197 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 C12orf29Q8N999 325 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.94□□□□□ -2.26
SSB-209ENST00000470621 ZNF439Q8NDP4 499 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 THEM6Q8WUY1 208 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 DYDC1Q8WWB3 177 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 MBD3L1Q8WWY6 194 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 C11orf40Q8WZ69 217 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 CCDC115Q96NT0 180 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 PBOV1Q9GZY1 135 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 TMEM126AQ9H061 195 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 TAF9BQ9HBM6 251 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 BATF3Q9NR55 127 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 OTORQ9NRC9 128 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 JPT1Q9UK76 154 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 CD109Q6YHK3 1445 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 CEP152O94986 1710 aa0.94□□□□□ -2.26
SSB-209ENST00000470621 NCOA6Q14686 2063 aaPredicted RBP0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms