RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 PAEPP09466 180 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF286BP0CG31 522 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 SMIM6P0DI80 62 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 LINC00694P0DN24 101 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 FABP2P12104 132 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 CCL5P13501 91 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 LGALS3P17931 250 aaKnown RBP2.33□□□□□ -2.04
ITGB1-208ENST00000464001 SDC2P34741 201 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 ARPP19P56211 112 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 RBM11P57052 281 aaKnown RBP2.33□□□□□ -2.04
ITGB1-208ENST00000464001 TAS2R20P59543 309 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 RPL18Q07020 188 aaKnown RBP2.33□□□□□ -2.04
ITGB1-208ENST00000464001 UBE2SQ16763 222 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 TMEM244Q5VVB8 128 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 TMEM14EPQ6UXP3 125 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 SDIM1Q6ZPB5 146 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 BPIFA4PQ86YQ2 179 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 OR8D4Q8NGM9 314 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 BRK1Q8WUW1 75 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 AP1S3Q96PC3 154 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 MGLLQ99685 303 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 TCEAL7Q9BRU2 100 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 LXNQ9BS40 222 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 MRPL32Q9BYC8 188 aaKnown RBP2.33□□□□□ -2.04
ITGB1-208ENST00000464001 CBLN4Q9NTU7 201 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 BAIAP2Q9UQB8 552 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 HS3ST2Q9Y278 367 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 CITO14578 2027 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 PRG4Q92954 1404 aaPredicted RBP2.33□□□□□ -2.04
ITGB1-208ENST00000464001 CPAMD8Q8IZJ3 1885 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 NCAPD3P42695 1498 aa2.33□□□□□ -2.04
ITGB1-208ENST00000464001 TRIOBPQ9H2D6 2365 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 A0A087X0T9 212 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 IRGMA1A4Y4 181 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 TMEM212A6NML5 194 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SOD1P00441 154 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 C1QAP02745 245 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 RNASE4P34096 147 aaKnown RBP2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SRP14P37108 136 aaKnown RBP2.32□□□□□ -2.04
ITGB1-208ENST00000464001 DYNLT3P51808 116 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 TMBIM6P55061 237 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 UBE2BP63146 152 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 EIF5AP63241 154 aaKnown RBP2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SELENOWP63302 87 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 BIKQ13323 160 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF141Q15928 474 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 FAM229BQ4G0N7 80 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SPANXN3Q5MJ09 141 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 LDLRAD2Q5SZI1 272 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 BCL2L15Q5TBC7 163 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 HAGHLQ6PII5 290 aaPredicted RBP2.32□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF322Q6U7Q0 402 aaPredicted RBP2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SCIMPQ6UWF3 145 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 C2orf91Q6ZV80 131 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF695Q8IW36 515 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 TMEM105Q8N8V8 129 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
ITGB1-208ENST00000464001 HEY1Q9Y5J3 304 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 TRAPPC1Q9Y5R8 145 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SPATA31E1Q6ZUB1 1445 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 TRAPPC8Q9Y2L5 1435 aa2.32□□□□□ -2.04
ITGB1-208ENST00000464001 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 TRBV7-6A0A0J9YX20 115 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 TXNDC9O14530 226 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 GGCTO75223 188 aaKnown RBP2.31□□□□□ -2.04
ITGB1-208ENST00000464001 CST7O76096 145 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 IGHV1-69P01742 117 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 IGHV3-7P01780 117 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 IGLC6P0CF74 106 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 MPV17P39210 176 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 YPEL3P61236 119 aaPredicted RBP2.31□□□□□ -2.04
ITGB1-208ENST00000464001 OCIAD2Q56VL3 154 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 RNASE10Q5GAN6 216 aaKnown RBP2.31□□□□□ -2.04
ITGB1-208ENST00000464001 ZNF705AQ6ZN79 300 aaPredicted RBP2.31□□□□□ -2.04
ITGB1-208ENST00000464001 LINC00305Q7Z4B0 112 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 DEFB128Q7Z7B8 93 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 PDZD9Q8IXQ8 264 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 IFT20Q8IY31 132 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 C3orf22Q8N5N4 141 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 OR4E2Q8NGC2 313 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 CLDND2Q8NHS1 167 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 TMEM106AQ96A25 262 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 NAA38Q9BRA0 125 aaKnown RBP2.31□□□□□ -2.04
ITGB1-208ENST00000464001 XAGE1AQ9HD64 81 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 MALRD1Q5VYJ5 2156 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 POLEQ07864 2286 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 RIMBP3CA6NJZ7 1639 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 RIMBP3BA6NNM3 1639 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 LTBP4Q8N2S1 1624 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 RIMBP3Q9UFD9 1639 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 KIDINS220Q9ULH0 1771 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 PLXNA3P51805 1871 aa2.31□□□□□ -2.04
ITGB1-208ENST00000464001 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 FAM92AA1XBS5 289 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 LRCOL1A6NCL2 159 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 C17orf51A8MQB3 221 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 F6UZH7 168 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 H3BQ85 93 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 TSPAN19P0C672 248 aa2.3□□□□□ -2.04
ITGB1-208ENST00000464001 CSRP1P21291 193 aaKnown RBP2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms