RNA–Protein interactions for RNA: ENST00000462577.5

PDCD4-204, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-204ENST00000462577 FOLR2P14207 255 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 CBLN1P23435 193 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 PAX9P55771 341 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 YPEL3P61236 119 aaPredicted RBP3.91□□□□□ -1.78
PDCD4-204ENST00000462577 RAB11AP62491 216 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 DEFA6Q01524 100 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 LCN12Q6JVE5 192 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 C11orf87Q6NUJ2 197 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 TMEM14EPQ6UXP3 125 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 UNQ9165/PRO28630Q6UXU0 137 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 GSG1LQ6UXU4 331 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 ZNF600Q6ZNG1 722 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 SLC16A13Q7RTY0 426 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 THAP8Q8NA92 274 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 UBAC2Q8NBM4 344 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 GINS3Q9BRX5 216 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 NMES1Q9C002 83 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 DAZ1Q9NQZ3 744 aaKnown RBP3.91□□□□□ -1.78
PDCD4-204ENST00000462577 NOTCH3Q9UM47 2321 aa3.91□□□□□ -1.78
PDCD4-204ENST00000462577 ZNF256Q9Y2P7 627 aaPredicted RBP3.91□□□□□ -1.78
PDCD4-204ENST00000462577 LSM4Q9Y4Z0 139 aaKnown RBP3.91□□□□□ -1.78
PDCD4-204ENST00000462577 PRKDCP78527 4128 aaKnown RBP3.91□□□□□ -1.78
PDCD4-204ENST00000462577 IGHV3-21A0A0B4J1V1 117 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 WI2-2373I1.2A0A1W2PRP0 233 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 A8MZ25 164 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 K7EIL1 84 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 WRBO00258 174 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 CCSO14618 274 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 SSSCA1O60232 199 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 TOMM40O96008 361 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 IGKV1-17P01599 117 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 MBPP02686 304 aaPredicted RBP3.9□□□□□ -1.79
PDCD4-204ENST00000462577 IFNA4P05014 189 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 CD5P06127 495 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 IAPPP10997 89 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 GP9P14770 177 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 SPNP16150 400 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 OR10J1P30954 320 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 RND2P52198 227 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 POLR2GP62487 172 aaKnown RBP eCLIP3.9□□□□□ -1.79
PDCD4-204ENST00000462577 GAMTQ14353 236 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 DEFB114Q30KQ6 69 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 KRTAP15-1Q3LI76 137 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 ASB13Q8WXK3 278 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 SLC35E1Q96K37 410 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 MAGT1Q9H0U3 335 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 VSIRQ9H7M9 311 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 PSENENQ9NZ42 101 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 MLXQ9UH92 298 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 STRAPQ9Y3F4 350 aaKnown RBP3.9□□□□□ -1.79
PDCD4-204ENST00000462577 DNAH9Q9NYC9 4486 aa3.9□□□□□ -1.79
PDCD4-204ENST00000462577 IGKV1D-37A0A075B6S9 117 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TRAV2A0A0B4J234 112 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 IGHV7-4-1A0A0J9YVY3 117 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 ZNF320A2RRD8 509 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 C5orf51A6NDU8 294 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 DIRC3C9JPN6 131 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 CHEK1O14757 476 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TSPAN4O14817 238 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 SCGB1D2O95969 90 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 CFDP00746 253 aaPredicted RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 IGHV3-48P01763 117 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 FABP1P07148 127 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 PVALBP20472 110 aaPredicted RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 EDN2P20800 178 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 CRYBB3P26998 211 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 BMI1P35226 326 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 NUP62P37198 522 aaPredicted RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 H2BFSP57053 126 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 RAP2BP61225 183 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 DLK1P80370 383 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 CYCSP99999 105 aaKnown RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 RGS21Q2M5E4 152 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 VWC2Q2TAL6 325 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TIGITQ495A1 244 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 CD300EQ496F6 205 aaPredicted RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 SPANXN5Q5MJ07 72 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 FAM90A2PQ658T7 463 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 OR8G2PQ6IF36 304 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TOMM20LQ6UXN7 152 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TMEM144Q7Z5S9 345 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TMEM61Q8N0U2 210 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 UXS1Q8NBZ7 420 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 DYNLRB2Q8TF09 96 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 NEU1Q99519 415 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TRGV9Q99603 122 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 SPAG8Q99932 426 aaPredicted RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 FAM110AQ9BQ89 295 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 GGACTQ9BVM4 153 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 TMEM231Q9H6L2 316 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 LYRM2Q9NU23 88 aaPredicted RBP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 GSKIPQ9P0R6 139 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 DKK2Q9UBU2 259 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 SMPXQ9UHP9 88 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 SLC45A2Q9UMX9 530 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 PUS1Q9Y606 427 aaKnown RBP eCLIP3.89□□□□□ -1.79
PDCD4-204ENST00000462577 ALG5Q9Y673 324 aa3.89□□□□□ -1.79
PDCD4-204ENST00000462577 AGRNO00468 2067 aa3.88□□□□□ -1.79
PDCD4-204ENST00000462577 IGKV1OR2-108A0A075B7D4 117 aa3.88□□□□□ -1.79
PDCD4-204ENST00000462577 TRAV14DV4A0A0A6YYC5 116 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms