RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 ZNRF2Q8NHG8 242 aa3.54□□□□□ -1.84
BRCA1-206ENST00000461574 COQ8AQ8NI60 647 aa3.54□□□□□ -1.84
BRCA1-206ENST00000461574 FCAMRQ8WWV6 532 aa3.54□□□□□ -1.84
BRCA1-206ENST00000461574 C8orf4Q9NR00 106 aa3.54□□□□□ -1.84
BRCA1-206ENST00000461574 DAPK2Q9UIK4 370 aa3.54□□□□□ -1.84
BRCA1-206ENST00000461574 LSM2Q9Y333 95 aaKnown RBP3.54□□□□□ -1.84
BRCA1-206ENST00000461574 DNAH5Q8TE73 4624 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 UBR4Q5T4S7 5183 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 SMIM30A4D0T7 59 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 FAM90A26D6RGX4 464 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 F5H768 121 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 H3BMM0 161 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 CORTO00230 105 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 SSX5O60225 188 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 HLA-DRB4P13762 266 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 CRYBB3P26998 211 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 OPRK1P41145 380 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 CBX5P45973 191 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 HOXA1P49639 335 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-206ENST00000461574 PPP5CP53041 499 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 SUB1P53999 127 aaKnown RBP eCLIP3.53□□□□□ -1.84
BRCA1-206ENST00000461574 PRCDQ00LT1 54 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 MLLT11Q13015 90 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-206ENST00000461574 OXA1LQ15070 435 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 BAK1Q16611 211 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 SPINK9Q5DT21 86 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 WDR73Q6P4I2 378 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 SIGLEC15Q6ZMC9 328 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 H2BFWTQ7Z2G1 175 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 PACRGLQ8N7B6 248 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 SLC35G3Q8N808 338 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 ZNF114Q8NC26 417 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 OR4B1Q8NGF8 309 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 LINC00052Q96N35 136 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 PDCD10Q9BUL8 212 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 MAGT1Q9H0U3 335 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 VCXQ9H320 206 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 NRN1Q9NPD7 142 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 IFT46Q9NQC8 304 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 FKBP14Q9NWM8 211 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 EHFQ9NZC4 300 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 HLA-DRB4X5D2U9 266 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
BRCA1-206ENST00000461574 TRAV18A0A075B6X5 111 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 TRAV1-2A0A0B4J238 106 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 MEIS3P1A6NDR6 274 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 H0YIZ8 118 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 PGLYRP1O75594 196 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-206ENST00000461574 TMEM50AO95807 157 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 IFNA5P01569 189 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 DEFB130BP0DP73 79 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 DEFB130AP0DP74 79 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 ALDH3B2P48448 385 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 ZNF674Q2M3X9 581 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 LCE1EQ5T753 118 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 LAIR2Q6ISS4 152 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 EBLN2Q6P2I7 272 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 SSX7Q7RTT5 188 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 LYPD1Q8N2G4 141 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 OR5AP2Q8NGF4 316 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 OR4C16Q8NGL9 310 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 OR6F1Q8NGZ6 308 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 LGALS14Q8TCE9 139 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 Q8WTZ3 238 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 FAM210AQ96ND0 272 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 MGLLQ99685 303 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 Q9H8V8 135 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 ENY2Q9NPA8 101 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 TPRKBQ9Y3C4 175 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 LINC00588Q9Y4M8 146 aa3.52□□□□□ -1.85
BRCA1-206ENST00000461574 FLG2Q5D862 2391 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-206ENST00000461574 TRAV30A0A087WSZ9 112 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 LYRM9A8MSI8 78 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 GPR31O00270 319 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 RGS10O43665 173 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 GSTZ1O43708 216 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-206ENST00000461574 CLN5O75503 358 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 NXPH3O95157 252 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 IL4P05112 153 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 ATP5G1P05496 136 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 ID1P41134 155 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 NKX2-1P43699 371 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-206ENST00000461574 ATP5G3P48201 142 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 RORCP51449 518 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 AKR1C2P52895 323 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 ERVFC1-1P60608 527 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 HSPE1P61604 102 aaKnown RBP3.51□□□□□ -1.85
BRCA1-206ENST00000461574 PSG9Q00887 426 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 USF2Q15853 346 aaPredicted RBP3.51□□□□□ -1.85
BRCA1-206ENST00000461574 TIGITQ495A1 244 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 PHLDA2Q53GA4 152 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 PXDC1Q5TGL8 231 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 GDF5OSQ5U4N7 250 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 C22orf42Q6IC83 251 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 FOXI2Q6ZQN5 318 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 HOGA1Q86XE5 327 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 CADM3Q8N126 398 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 RNASE11Q8TAA1 199 aaKnown RBP3.51□□□□□ -1.85
BRCA1-206ENST00000461574 GLMPQ8WWB7 406 aa3.51□□□□□ -1.85
BRCA1-206ENST00000461574 MRGPRFQ96AM1 343 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms