RNA–Protein interactions for RNA: ENST00000456517.2

HIPK3-203, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HIPK3, Length 7,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-203ENST00000456517 LRRK1Q38SD2 2015 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 RNF166Q96A37 237 aaPredicted RBP12.01□□□□□ -0.49
HIPK3-203ENST00000456517 PLSCR4Q9NRQ2 329 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 BRCA1P38398 1863 aaKnown RBP12.01□□□□□ -0.49
HIPK3-203ENST00000456517 IGHV1-8P0DP01 117 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 LINC01356Q8N9X3 169 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 SPCS1Q9Y6A9 102 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 SRSF6Q13247 344 aaKnown RBP12.01□□□□□ -0.49
HIPK3-203ENST00000456517 TPTE2P1Q5T6R2 138 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 ZNF236Q9UL36 1845 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 PAX4O43316 350 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 NBASA2RRP1 2371 aa12.01□□□□□ -0.49
HIPK3-203ENST00000456517 PGPEP1LA6NFU8 196 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 TMEM178BH3BS89 294 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 CA1P00915 261 aaPredicted RBP12□□□□□ -0.49
HIPK3-203ENST00000456517 LINC00114Q6XXX2 140 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 GATD1Q8NB37 220 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 LYZL4Q96KX0 146 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 IGKV2-40A0A087WW87 121 aaPredicted RBP12□□□□□ -0.49
HIPK3-203ENST00000456517 A0A0G2JNJ9 132 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 IGKV2D-40P01614 121 aaPredicted RBP12□□□□□ -0.49
HIPK3-203ENST00000456517 LHFPL4Q7Z7J7 247 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 ZNF329Q86UD4 541 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 Q9UFV3 132 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
HIPK3-203ENST00000456517 SPSB3Q6PJ21 355 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 DOCK4Q8N1I0 1966 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 HOXA3O43365 443 aaPredicted RBP12□□□□□ -0.49
HIPK3-203ENST00000456517 NAPSAO96009 420 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 TRBV7-1A0A0A6YYK4 115 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 IGHV1-3A0A0C4DH29 117 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 ZNF876PQ49A33 203 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 C18orf12Q96KH6 178 aa12□□□□□ -0.49
HIPK3-203ENST00000456517 PMS2P5A8MQ11 134 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 F8WEM9 126 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 FCN3O75636 299 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 NDPQ00604 133 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 A0A1W2PRE2 83 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 NHP2Q9NX24 153 aaKnown RBP11.99□□□□□ -0.49
HIPK3-203ENST00000456517 IGLV3-32A0A0A0MS00 114 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 SLC25A16P16260 332 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 EFNB3Q15768 340 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 GTF3C1Q12789 2109 aa11.99□□□□□ -0.49
HIPK3-203ENST00000456517 IGFBP3P17936 291 aaPredicted RBP11.99□□□□□ -0.49
HIPK3-203ENST00000456517 SELLP14151 372 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 RPUSD1Q9UJJ7 312 aaKnown RBP11.98□□□□□ -0.49
HIPK3-203ENST00000456517 OOSP1A8MZH6 123 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 INS-IGF2F8WCM5 200 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 INSP01308 110 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 RPL23P62829 140 aaKnown RBP11.98□□□□□ -0.49
HIPK3-203ENST00000456517 HEPN1Q6WQI6 88 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 FGFBP3Q8TAT2 258 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 A0A1B0GV90 55 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 CCL1P22362 96 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 NPC2P61916 151 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 PRDM13Q9H4Q3 707 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 CD300EQ496F6 205 aaPredicted RBP11.98□□□□□ -0.49
HIPK3-203ENST00000456517 C10orf55Q5SWW7 151 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 USF3Q68DE3 2245 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 LINC00587B1AMM8 73 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 SRRM5B3KS81 715 aa11.98□□□□□ -0.49
HIPK3-203ENST00000456517 SP5Q6BEB4 398 aaPredicted RBP11.98□□□□□ -0.49
HIPK3-203ENST00000456517 M0R2P5 195 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 A0A1B0GV72 72 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 C6orf226Q5I0X4 101 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 NIT1Q86X76 327 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 DEFB104AQ8WTQ1 72 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 GTF3AQ92664 365 aaKnown RBP11.97□□□□□ -0.49
HIPK3-203ENST00000456517 DOCK9Q9BZ29 2069 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 FAM90A9PA6NNJ1 464 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 TOMM40O96008 361 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 USMG5Q96IX5 58 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 LAMTOR3Q9UHA4 124 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 PHF3Q92576 2039 aaKnown RBP11.97□□□□□ -0.49
HIPK3-203ENST00000456517 IGKCP01834 107 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 C1QTNF9P0C862 333 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 CEACAM8P31997 349 aaPredicted RBP11.97□□□□□ -0.49
HIPK3-203ENST00000456517 RNF223E7ERA6 249 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 PSG1P11464 419 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 DMRT1Q9Y5R6 373 aa11.97□□□□□ -0.49
HIPK3-203ENST00000456517 PKDREJQ9NTG1 2253 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 M0R1W7 72 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 IGKV1-9A0A0C4DH69 117 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 SHISA3A0PJX4 238 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 BPESC1Q9GZL8 116 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 LAGE3Q14657 143 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 SLC25A39Q9BZJ4 359 aaPredicted RBP11.96□□□□□ -0.49
HIPK3-203ENST00000456517 OSTCQ9NRP0 149 aa11.96□□□□□ -0.49
HIPK3-203ENST00000456517 SERF1AO75920 110 aa11.96□□□□□ -0.5
HIPK3-203ENST00000456517 NRN1Q9NPD7 142 aa11.96□□□□□ -0.5
HIPK3-203ENST00000456517 ERVH48-1M5A8F1 160 aa11.96□□□□□ -0.5
HIPK3-203ENST00000456517 C5orf30Q96GV9 206 aa11.96□□□□□ -0.5
HIPK3-203ENST00000456517 MS4A6AQ9H2W1 248 aa11.96□□□□□ -0.5
HIPK3-203ENST00000456517 TRAV5A0A0B4J249 113 aa11.95□□□□□ -0.5
HIPK3-203ENST00000456517 EXOC3-AS1Q8N2X6 119 aa11.95□□□□□ -0.5
HIPK3-203ENST00000456517 ERCC8Q13216 396 aa11.95□□□□□ -0.5
HIPK3-203ENST00000456517 TMEM249Q2WGJ8 235 aa11.95□□□□□ -0.5
HIPK3-203ENST00000456517 SCRT1Q9BWW7 348 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms