RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 SP1P08047 785 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 TNFRSF1AP19438 455 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 DSCR4P56555 118 aaPredicted RBP6.8□□□□□ -1.32
SMCO1-202ENST00000452776 LY6DQ14210 128 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 PLA2G2CQ5R387 149 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 AAED1Q7RTV5 226 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 RLN3Q8WXF3 142 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 TMEM158Q8WZ71 300 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 RPEQ96AT9 228 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 RITA1Q96K30 269 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 CITED1Q99966 193 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 RTL8AQ9BWD3 113 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 U3KQK5 164 aa6.8□□□□□ -1.32
SMCO1-202ENST00000452776 MYO7BQ6PIF6 2116 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 TRBV25-1A0A075B6N4 114 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 CSN3P07498 182 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 MRPL23Q16540 153 aaKnown RBP6.79□□□□□ -1.32
SMCO1-202ENST00000452776 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
SMCO1-202ENST00000452776 ZNF493Q6ZR52 646 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 MOB3BQ86TA1 216 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 PDPNQ86YL7 162 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 PCP2Q8IVA1 136 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 DDB2Q92466 427 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 PTH2Q96A98 100 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 PRNDQ9UKY0 176 aa6.79□□□□□ -1.32
SMCO1-202ENST00000452776 C15orf61A6NNL5 157 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 H0Y8X5 98 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 DLL1O00548 723 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 SPINT2O43291 252 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 LTAP01374 205 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 ZNF138P52744 262 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 TWIST1Q15672 202 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 PIP4P1Q86T03 277 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 YAF2Q8IY57 180 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 OSR1Q8TAX0 266 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-202ENST00000452776 FAM167A-AS1Q96KT0 104 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 S1PR3Q99500 378 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 TIMM8BQ9Y5J9 83 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-202ENST00000452776 F11RQ9Y624 299 aaKnown RBP6.78□□□□□ -1.32
SMCO1-202ENST00000452776 IGHV5-51A0A0C4DH38 117 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 TMEM213A2RRL7 107 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 A8MWV9 139 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 C12orf77C9JDV5 145 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 COX7A2P2O60397 106 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 FCGR3BO75015 233 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 SS18L1O75177 396 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-202ENST00000452776 IGKCP01834 107 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 B4GALT1P15291 398 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 MYCNOSP40205 109 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 INSL3P51460 131 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 ZNF137PP52743 207 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 PLP2Q04941 152 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 C2orf83Q53S99 150 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 NRGNQ92686 78 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 LINC00479Q96M42 142 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 ZNF488Q96MN9 340 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 FGF23Q9GZV9 251 aaPredicted RBP6.78□□□□□ -1.32
SMCO1-202ENST00000452776 RAB9BQ9NP90 201 aa6.78□□□□□ -1.32
SMCO1-202ENST00000452776 ARHGAP21Q5T5U3 1957 aa6.77□□□□□ -1.32
SMCO1-202ENST00000452776 LINC00473A8K010 186 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 DPM2O94777 84 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 BRI3O95415 125 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
SMCO1-202ENST00000452776 COL8A1P27658 744 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 SUB1P53999 127 aaKnown RBP eCLIP6.77□□□□□ -1.33
SMCO1-202ENST00000452776 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 SBSPONQ8IVN8 264 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 ORMDL3Q8N138 153 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 OR1L8Q8NGR8 309 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 OR10J6PQ8NGY7 276 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 ZNF837Q96EG3 531 aaPredicted RBP6.77□□□□□ -1.33
SMCO1-202ENST00000452776 HIST1H4GQ99525 98 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 RNF208Q9H0X6 261 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 TMEM14BQ9NUH8 114 aa6.77□□□□□ -1.33
SMCO1-202ENST00000452776 SPTY2D1-AS1A0A0U1RR47 76 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 SCGB1C2P0DMR2 95 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 KIR2DL1P43626 348 aaPredicted RBP6.76□□□□□ -1.33
SMCO1-202ENST00000452776 FOXF2Q12947 444 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 ZNF766Q5HY98 468 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 TMEM116Q8NCL8 245 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 VPREB3Q9UKI3 123 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 IGLV3-12A0A075B6K2 115 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 A0A1W2PPI3 338 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 LINC01546A6NGU7 62 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 K7ERJ3 54 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 MOSP00540 346 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 IFI27P40305 119 aaPredicted RBP6.76□□□□□ -1.33
SMCO1-202ENST00000452776 DNAJC30Q96LL9 226 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 IFI27L2Q9H2X8 130 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
SMCO1-202ENST00000452776 PGPA6NDG6 321 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 NCBP2LA6PVI3 153 aaKnown RBP6.75□□□□□ -1.33
SMCO1-202ENST00000452776 PATE4P0C8F1 98 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 C3AR1Q16581 482 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 C16orf47Q6ZP98 133 aaPredicted RBP6.75□□□□□ -1.33
SMCO1-202ENST00000452776 NFE4Q86UQ8 179 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 PPP1R27Q86WC6 154 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 OR13H1Q8NG92 308 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 FGFBP3Q8TAT2 258 aa6.75□□□□□ -1.33
SMCO1-202ENST00000452776 C18orf15Q96N68 181 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms