RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 FAM60AQ9NP50 221 aa2.59□□□□□ -1.99
HMGB1P45-201ENST00000435986 SCN3BQ9NY72 215 aa2.59□□□□□ -1.99
HMGB1P45-201ENST00000435986 WDR97A6NE52 1622 aa2.59□□□□□ -1.99
HMGB1P45-201ENST00000435986 CHD1O14646 1710 aa2.59□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF609O15014 1411 aa2.59□□□□□ -2
HMGB1P45-201ENST00000435986 NAIPQ13075 1403 aa2.59□□□□□ -2
HMGB1P45-201ENST00000435986 PRG4Q92954 1404 aaPredicted RBP2.59□□□□□ -2
HMGB1P45-201ENST00000435986 ERBINQ96RT1 1412 aa2.59□□□□□ -2
HMGB1P45-201ENST00000435986 NCAPD3P42695 1498 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 ARHGEF11O15085 1522 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 TMEM218A2RU14 115 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 A8MUU9 505 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 TMEM256-PLSCR3K7ERE1 68 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 NDUFB2O95178 105 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 AKAIN1P0CW23 69 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF728P0DKX0 622 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 NPPCP23582 126 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 CRYBB3P26998 211 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 PSMB8P28062 276 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 RPL22P35268 128 aaKnown RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 TGFBR1P36897 503 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 RPL27AP46776 148 aaKnown RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 GNG4P50150 75 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 HIST1H4AP62805 103 aaKnown RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 UBE2BP63146 152 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 MEF2BQ02080 365 aaPredicted RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 HES1Q14469 280 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF141Q15928 474 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 LGALS9BQ3B8N2 356 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 MRPL51Q4U2R6 128 aaKnown RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 SPANXN3Q5MJ09 141 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 LGALS9CQ6DKI2 356 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 OR5A2Q8NGI9 324 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 OR8D4Q8NGM9 314 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 BRK1Q8WUW1 75 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 ZC2HC1AQ96GY0 325 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 YPEL2Q96QA6 119 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 ADAT1Q9BUB4 502 aaKnown RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 GABARAPL1Q9H0R8 117 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 TMEM133Q9H2Q1 129 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 FAIMQ9NVQ4 179 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF586Q9NXT0 402 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 MARCOQ9UEW3 520 aaPredicted RBP2.58□□□□□ -2
HMGB1P45-201ENST00000435986 SNX12Q9UMY4 172 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 RNF11Q9Y3C5 154 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 TRAPPC8Q9Y2L5 1435 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 DOCK6Q96HP0 2047 aa2.58□□□□□ -2
HMGB1P45-201ENST00000435986 CEP170Q5SW79 1584 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 ADAMTSL1Q8N6G6 1762 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 A0A087X0T9 212 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 BBIP1A8MTZ0 92 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF670-ZNF695F2Z2N8 137 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 H3BMG7 143 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 SNAPC5O75971 98 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 CXCL1P09341 107 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 HLA-EP13747 358 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 CRYGSP22914 178 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 TSPEAR-AS2P59090 65 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 RHOGP84095 191 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 RPL18Q07020 188 aaKnown RBP2.57□□□□□ -2
HMGB1P45-201ENST00000435986 LINC01554Q52M75 96 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 LDLRAD2Q5SZI1 272 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 ZNF767PQ75MW2 155 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 SPATA12Q7Z6I5 190 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 C3orf22Q8N5N4 141 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 TEX29Q8N6K0 151 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 ZFAND2AQ8N6M9 145 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 TMEM191AQ9H0A3 160 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 BANF2Q9H503 90 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 LINC00574Q9H8X3 128 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 XAGE1AQ9HD64 81 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 CCDC167Q9P0B6 97 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 BOKQ9UMX3 212 aaPredicted RBP2.57□□□□□ -2
HMGB1P45-201ENST00000435986 TMEM2Q9UHN6 1383 aa2.57□□□□□ -2
HMGB1P45-201ENST00000435986 TCOF1Q13428 1488 aaKnown RBP2.57□□□□□ -2
HMGB1P45-201ENST00000435986 IGKV1D-17A0A075B6S4 117 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 TRAV30A0A087WSZ9 112 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 A0A0D9SEW6 157 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 LOC100130705A0A1B0GUX0 176 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 A6NED7 52 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 IFITM5A6NNB3 132 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 C19orf84I3L1E1 186 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 UBFD1O14562 309 aaKnown RBP2.56□□□□□ -2
HMGB1P45-201ENST00000435986 LEPROTO15243 131 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 NDUFB3O43676 98 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 IGKV1-17P01599 117 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 C1QAP02745 245 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 CGB3P0DN86 165 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 CGB7P0DN87 165 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 DYNLT3P51808 116 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 HBBP68871 147 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 CCSMST1Q4G0I0 132 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 HSD17B12Q53GQ0 312 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 BPIFA4PQ86YQ2 179 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 PP6455Q8WZ26 134 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 RBPMSQ93062 196 aaKnown RBP2.56□□□□□ -2
HMGB1P45-201ENST00000435986 OR4C12Q96R67 309 aa2.56□□□□□ -2
HMGB1P45-201ENST00000435986 MRPL32Q9BYC8 188 aaKnown RBP2.56□□□□□ -2
HMGB1P45-201ENST00000435986 RERGLQ9H628 205 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms