RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 ZNF680Q8NEM1 530 aa10.93□□□□□ -0.66
CDK12-201ENST00000430627 ISOC2Q96AB3 205 aa10.93□□□□□ -0.66
CDK12-201ENST00000430627 AWAT1Q58HT5 328 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 C10orf55Q5SWW7 151 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 OR2K2Q8NGT1 345 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 ZNF625Q96I27 306 aaPredicted RBP10.92□□□□□ -0.66
CDK12-201ENST00000430627 ANKRD31Q8N7Z5 1873 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 FAM90A26D6RGX4 464 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 SUPT4H1P63272 117 aaKnown RBP10.92□□□□□ -0.66
CDK12-201ENST00000430627 CYSLTR1Q9Y271 337 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.92□□□□□ -0.66
CDK12-201ENST00000430627 FXYD1O00168 92 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 IGLV3-21P80748 117 aaPredicted RBP10.92□□□□□ -0.66
CDK12-201ENST00000430627 COL4A5P29400 1685 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 PRSS29PA6NIE9 313 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 SMIM10L1P0DMW3 83 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 FAM90A2PQ658T7 463 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 GTSF1Q8WW33 167 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 SMIM10Q96HG1 83 aa10.92□□□□□ -0.66
CDK12-201ENST00000430627 MDC1Q14676 2089 aaKnown RBP10.92□□□□□ -0.66
CDK12-201ENST00000430627 RASL10AQ92737 203 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 KLF2Q9Y5W3 355 aaPredicted RBP10.91□□□□□ -0.66
CDK12-201ENST00000430627 ZNF98A6NK75 572 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 TRGC2P03986 189 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 FOXG1P55316 489 aaPredicted RBP10.91□□□□□ -0.66
CDK12-201ENST00000430627 CFHR2P36980 270 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 H1FOOQ8IZA3 346 aaPredicted RBP10.91□□□□□ -0.66
CDK12-201ENST00000430627 TEX43Q6ZNM6 134 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 FAM74A7A6NL05 159 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 YPEL1O60688 119 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 AMBPP02760 352 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 YPEL2Q96QA6 119 aa10.91□□□□□ -0.66
CDK12-201ENST00000430627 H3BMM0 161 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 DEFB105AQ8NG35 78 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 CACNG8Q8WXS5 425 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 UBE2WQ96B02 151 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 IGKV1D-43A0A0B4J1Z2 117 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 NPIPB13A6NJU9 1138 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 NPIPB5A8MRT5 1133 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 GALP22466 123 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 ATP5IP56385 69 aaPredicted RBP10.9□□□□□ -0.66
CDK12-201ENST00000430627 C1orf43Q9BWL3 253 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 VPREB3Q9UKI3 123 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 IGKV1-39P01597 117 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 IGKV1D-39P04432 117 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 UBE2AP49459 152 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 TMEM91Q6ZNR0 172 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 HSPB9Q9BQS6 159 aa10.9□□□□□ -0.66
CDK12-201ENST00000430627 KNL1Q8NG31 2342 aa10.9□□□□□ -0.67
CDK12-201ENST00000430627 NINQ8N4C6 2090 aa10.9□□□□□ -0.67
CDK12-201ENST00000430627 DEFB4AO15263 64 aa10.9□□□□□ -0.67
CDK12-201ENST00000430627 ALX3O95076 343 aa10.9□□□□□ -0.67
CDK12-201ENST00000430627 C1QCP02747 245 aa10.9□□□□□ -0.67
CDK12-201ENST00000430627 IGHV4-30-2A0A087WSY4 118 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 NXPH4O95158 308 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 IGKV1-5P01602 117 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 RBMY1FQ15415 496 aaKnown RBP10.89□□□□□ -0.67
CDK12-201ENST00000430627 SFTA2Q6UW10 78 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 RPP21Q9H633 154 aaKnown RBP10.89□□□□□ -0.67
CDK12-201ENST00000430627 COL4A1P02462 1669 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 ZNF318Q5VUA4 2279 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 COL11A2P13942 1736 aaPredicted RBP10.89□□□□□ -0.67
CDK12-201ENST00000430627 LY75O60449 1722 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 ARAP2Q8WZ64 1704 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 IGHV3-38A0A0C4DH36 116 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 GAFA1Q96PS6 74 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 FSTP19883 344 aa10.89□□□□□ -0.67
CDK12-201ENST00000430627 GRNP28799 593 aaKnown RBP10.88□□□□□ -0.67
CDK12-201ENST00000430627 UQCC3Q6UW78 93 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 SMIM8Q96KF7 97 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 TRAV12-2A0A075B6T6 113 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 G3V318 75 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 PYYP10082 97 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 SRSF1Q07955 248 aaKnown RBP eCLIP10.88□□□□□ -0.67
CDK12-201ENST00000430627 ATOH7Q8N100 152 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 ABCA4P78363 2273 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 A0A1B0GUT8 65 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 VWC2LB2RUY7 222 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 M0R2N4 97 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 PFN2P35080 140 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 SPATA45Q537H7 98 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 RBM38Q9H0Z9 239 aaKnown RBP10.88□□□□□ -0.67
CDK12-201ENST00000430627 MS4A6AQ9H2W1 248 aa10.88□□□□□ -0.67
CDK12-201ENST00000430627 NOP10Q9NPE3 64 aaKnown RBP10.88□□□□□ -0.67
CDK12-201ENST00000430627 K7ERU9 68 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 CRLF1O75462 422 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 PSG3Q16557 428 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 PAQR4Q8N4S7 273 aaPredicted RBP10.87□□□□□ -0.67
CDK12-201ENST00000430627 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 ATP6V0BQ99437 205 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 CHTOPQ9Y3Y2 248 aaKnown RBP10.87□□□□□ -0.67
CDK12-201ENST00000430627 SNAI2O43623 268 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 NDUFS7O75251 213 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 WBP1Q96G27 269 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 PSG8Q9UQ74 426 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 ZNF506Q5JVG8 444 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 C8orf49Q96NF6 230 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 GAS1P54826 345 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 C9orf139Q6ZV77 190 aa10.87□□□□□ -0.67
CDK12-201ENST00000430627 RSPO3Q9BXY4 272 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms