RNA–Protein interactions for RNA: ENST00000427110.6

PTPRC-208, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-208ENST00000427110 OR4K17Q8NGC6 315 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 OR4C16Q8NGL9 310 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 OR10AC1Q8NH08 325 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF563Q8TA94 476 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 LMX1AQ8TE12 382 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 THEM6Q8WUY1 208 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 RNF133Q8WVZ7 376 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CCL17Q92583 94 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 TSLPQ969D9 159 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM106AQ96A25 262 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF75AQ96N20 296 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 RBP7Q96R05 134 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 AMELYQ99218 206 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 SLC25A21Q9BQT8 299 aaPredicted RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 OR8D2Q9GZM6 311 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 RAB1BQ9H0U4 201 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 PRO3102Q9H379 93 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 FAM206AQ9NX38 181 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 GLTPQ9NZD2 209 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 RBM12B-AS1Q9P1G2 102 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CYB5R1Q9UHQ9 305 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 ANAPC10Q9UM13 185 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HHLA2Q9UM44 414 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 HSPB11Q9Y547 144 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 R4GMQ9 66 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 SDK1Q7Z5N4 2213 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 USP34Q70CQ2 3546 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 MED12Q93074 2177 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 MED13Q9UHV7 2174 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 SHANK1Q9Y566 2161 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 TNRC18O15417 2968 aaPredicted RBP1.17□□□□□ -2.22
PTPRC-208ENST00000427110 A0A0C4DFX4 3053 aa1.17□□□□□ -2.22
PTPRC-208ENST00000427110 CHD3Q12873 2000 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PCNX2A6NKB5 2137 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DNAJC13O75165 2243 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF407Q9C0G0 2248 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PTPRBP23467 1997 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TANC2Q9HCD6 1990 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DSCAML1Q8TD84 2053 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 EYSQ5T1H1 3165 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TRBV6-7A0A0A0MS04 114 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TRAV14DV4A0A0A6YYC5 116 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TRAV8-3A0A0A6YYJ7 113 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 IGKV1D-43A0A0B4J1Z2 117 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 A0A0D9SG52 128 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM269A0A1B0GVZ9 245 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 A6NIN4 97 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 RFPL4AA6NLU0 287 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TMEM14DPA8MWL7 114 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DISC1C4P0D8 188 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF878C9JN71 531 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 E7EQL1 145 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 RFPL4AL1F8VTS6 287 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SMLR1H3BR10 107 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 H7C1C5 153 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 M0R233 179 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 YKT6O15498 198 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 FGF16O43320 207 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SSNA1O43805 119 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 NOS1APO75052 506 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 RPP14O95059 124 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 MPC2O95563 127 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CRYZL1O95825 349 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CFDP00746 253 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 IGKV1D-33P01593 117 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 IGKV1-33P01594 117 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 IGHV3-53P01767 116 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 HLA-AP01891 365 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 APOC1P02654 83 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TTRP02766 147 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CD3DP04234 171 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 NMBP08949 121 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 OR4E1P0C645 316 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 UBBP0CG47 229 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLC2A1P11166 492 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SLC25A4P12235 298 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CXCL2P19875 107 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 AGTR1P30556 359 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 S100A11P31949 105 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CBX5P45973 191 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 LGALS7P47929 136 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 EMP2P54851 167 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CLDN12P56749 244 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 H2BFSP57053 126 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ARPC4P59998 168 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 TSPAN5P62079 268 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SNRPD2P62316 118 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 LCN6P62502 163 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 HBG1P69891 147 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 HBG2P69892 147 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DCDP81605 110 aaKnown RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PLCXD2Q0VAA5 305 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 ZNF345Q14585 488 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 SURF2Q15527 256 aaPredicted RBP1.16□□□□□ -2.22
PTPRC-208ENST00000427110 NNATQ16517 81 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 DEFB133Q30KQ1 61 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 PLPPR5Q32ZL2 321 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 CEACAM21Q3KPI0 293 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 GLYATL3Q5SZD4 288 aa1.16□□□□□ -2.22
PTPRC-208ENST00000427110 C10orf128Q5T292 105 aa1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms