RNA–Protein interactions for RNA: ENST00000409855.5

SCN7A-201, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN7A, Length 7,183 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-201ENST00000409855 DPRXA6NFQ7 191 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 C5orf52A6NGY3 159 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 C17orf98A8MV24 154 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 PIN1P1O15428 100 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 CCL25O15444 150 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 VENTXO95231 258 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 CGB7P0DN87 165 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 CKS2P33552 79 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SAA4P35542 130 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 EWSR1Q01844 656 aaKnown RBP eCLIP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 BAK1Q16611 211 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 LINC00114Q6XXX2 140 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 ZNF497Q6ZNH5 498 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 ZNF525Q8N782 197 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 CHAC1Q9BUX1 264 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SLC35B3Q9H1N7 401 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 PLSCR3Q9NRY6 295 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 ZNF638Q14966 1978 aaKnown RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 TCHHQ07283 1943 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 PLXNB2O15031 1838 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 BRWD3Q6RI45 1802 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 TRBV6-7A0A0A0MS04 114 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 C9JQL5 133 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 F5H768 121 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 H3BMH7 237 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 PHOX2AO14813 284 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 WISP3O95389 354 aaPredicted RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 IGLV1-44P01699 117 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SAA1P0DJI8 122 aaPredicted RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 MPZP25189 248 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 RNASE4P34096 147 aaKnown RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 FAM3BP58499 235 aaPredicted RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 ERCC8Q13216 396 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 TRPT1Q86TN4 253 aaKnown RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 GGNQ86UU5 652 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 CBLN2Q8IUK8 224 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 IGFBPL1Q8WX77 278 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 ZNF319Q9P2F9 582 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 DCHS2Q6V1P9 2916 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SAA2-SAA4A0A096LPE2 208 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 TRBV5-3A0A0A0MS03 114 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 F8VVB4 439 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 F8VWA3 439 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 K7EMT4 169 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 HLA-DQB1P01920 261 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SAA2P0DJI9 122 aaPredicted RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 LYL1P12980 280 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 CXCL5P42830 114 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 RPL29P47914 159 aaKnown RBP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SRSF9Q13242 221 aaKnown RBP eCLIP1.72□□□□□ -2.13
SCN7A-201ENST00000409855 BSXQ3C1V8 233 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 SNAI3Q3KNW1 292 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 PIGYQ3MUY2 71 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 HCP5Q6MZN7 132 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 ZNF826PQ6ZT77 177 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 BOD1L2Q8IYS8 172 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 RNF182Q8N6D2 247 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 FLVCR1-AS1Q8TAF5 88 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 MRGPRFQ96AM1 343 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 FLVCR2Q9UPI3 526 aa1.72□□□□□ -2.13
SCN7A-201ENST00000409855 TRAV10A0A0B4J240 114 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 A0A1W2PPE3 182 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 SMIM30A4D0T7 59 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 CA1P00915 261 aaPredicted RBP1.71□□□□□ -2.13
SCN7A-201ENST00000409855 C1QBP02746 253 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 MORN2Q502X0 79 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 FGFRL1Q8N441 504 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 C11orf44Q8N8P7 122 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 NABP2Q9BQ15 211 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 RHPN1-AS1Q9BWJ2 59 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 MRPL13Q9BYD1 178 aaKnown RBP1.71□□□□□ -2.13
SCN7A-201ENST00000409855 LINC00474Q9P2X8 69 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 CYSLTR1Q9Y271 337 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 LENEPQ9Y5L5 61 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 F11RQ9Y624 299 aaKnown RBP1.71□□□□□ -2.13
SCN7A-201ENST00000409855 V9GYH0 126 aa1.71□□□□□ -2.13
SCN7A-201ENST00000409855 CCDC88CQ9P219 2028 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 FER1L6Q2WGJ9 1857 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 GTF3C1Q12789 2109 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 CSMD1Q96PZ7 3565 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 IGHV3-72A0A0B4J1Y9 119 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 A0A1B0GV50 99 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 C7orf71A4D174 169 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 LYRM9A8MSI8 78 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 TMEM14DPA8MWL7 114 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 VWC2LB2RUY7 222 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 CCL24O00175 119 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 TNFRSF13BO14836 293 aaPredicted RBP1.71□□□□□ -2.14
SCN7A-201ENST00000409855 PRKNO60260 465 aaPredicted RBP1.71□□□□□ -2.14
SCN7A-201ENST00000409855 HNRNPA3P51991 378 aaKnown RBP1.71□□□□□ -2.14
SCN7A-201ENST00000409855 HBBP68871 147 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 SRSF1Q07955 248 aaKnown RBP eCLIP1.71□□□□□ -2.14
SCN7A-201ENST00000409855 TMEM200BQ69YZ2 307 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 ATP6V0E2Q8NHE4 81 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 RARRES2Q99969 163 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 SLC25A39Q9BZJ4 359 aaPredicted RBP1.71□□□□□ -2.14
SCN7A-201ENST00000409855 MRPL36Q9P0J6 103 aaKnown RBP1.71□□□□□ -2.14
SCN7A-201ENST00000409855 ZGRF1Q86YA3 2104 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 RGPD2P0DJD1 1756 aa1.71□□□□□ -2.14
SCN7A-201ENST00000409855 IGKV1D-42A0A075B6H8 117 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms