RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 LDLRAD2Q5SZI1 272 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 C5orf17Q8NAS9 161 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 RFESDQ8TAC1 157 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 H1FXQ92522 213 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 TMEM14CQ9P0S9 112 aa4.11□□□□□ -1.75
FGD4-201ENST00000395740 RPUSD1Q9UJJ7 312 aaKnown RBP4.11□□□□□ -1.75
FGD4-201ENST00000395740 GAGE12BA1L429 117 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 H3BRM9 83 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 COX7A2P2O60397 106 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 ACTL6BO94805 426 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 APOA2P02652 100 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 GLRXP35754 106 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 SCGB2A2Q13296 93 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 VAMP3Q15836 100 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 Q56UQ5 140 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 FAM53AQ6NSI3 398 aaPredicted RBP4.1□□□□□ -1.75
FGD4-201ENST00000395740 GTF2H5Q6ZYL4 71 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 SSX8Q7RTT4 187 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 PDPNQ86YL7 162 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 OR5AN1Q8NGI8 311 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 ZNF48Q96MX3 618 aaPredicted RBP4.1□□□□□ -1.75
FGD4-201ENST00000395740 GCM1Q9NP62 436 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 SPRR3Q9UBC9 169 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 ZNF835Q9Y2P0 537 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 PTPRZ1P23471 2315 aaPredicted RBP4.1□□□□□ -1.75
FGD4-201ENST00000395740 IGLV3-9A0A075B6K5 115 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 LOC102724200A0A096LPH7 203 aaPredicted RBP4.1□□□□□ -1.75
FGD4-201ENST00000395740 IGHV1-24A0A0C4DH33 117 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 A0A1W2PNU3 283 aaPredicted RBP4.1□□□□□ -1.75
FGD4-201ENST00000395740 TMEM189A5PLL7 270 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 SHISA9B4DS77 424 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 CECR9P0C854 216 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 CT45A6P0DMU7 189 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 CT45A5P0DMU8 189 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 CT45A7P0DMV0 189 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 LGALS7P47929 136 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 ZNF137PP52743 207 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 LINC00205P59089 165 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 TEX36Q5VZQ5 186 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
FGD4-201ENST00000395740 LYPD1Q8N2G4 141 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 OR9G4Q8NGQ1 327 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 OR10AG1Q8NH19 301 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 FAM168AQ92567 244 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 ZNF355PQ9NSJ1 428 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 PCNX2A6NKB5 2137 aa4.1□□□□□ -1.75
FGD4-201ENST00000395740 FBLL1A6NHQ2 334 aaKnown RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 PRR33A8MZF0 331 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 CDX4O14627 284 aaPredicted RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 APOHP02749 345 aaPredicted RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 IGLC1P0CG04 106 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 CT45A10P0DMU9 189 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 CSN1S1P47710 185 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 TCL1AP56279 114 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 RPL8P62917 257 aaKnown RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 RIGQ13278 110 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 LGALS9BQ3B8N2 356 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 MPV17L2Q567V2 206 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 TCTEX1D4Q5JR98 221 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 LGALS9CQ6DKI2 356 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 LCN12Q6JVE5 192 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 VHLLQ6RSH7 139 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 PATE2Q6UY27 113 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 ZNF788Q6ZQV5 615 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 ZNF493Q6ZR52 646 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 C1orf229Q6ZS94 237 aaPredicted RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 NEGR1Q7Z3B1 354 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 VKORC1L1Q8N0U8 176 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 HES7Q9BYE0 225 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 OTORQ9NRC9 128 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 LINC00312Q9Y6C7 94 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 MGAQ8IWI9 3026 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 CACNA1DQ01668 2161 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 IGKV1D-37A0A075B6S9 117 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 hADV38S2A0JD32 116 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 A6NDN8 102 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 NUDT3O95989 172 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 P01737 135 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 GPR183P32249 361 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 EDDM3AQ14507 147 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 UFSP1Q6NVU6 142 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 OR4X2Q8NGF9 303 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 OR5A1Q8NGJ0 315 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 OR9G1Q8NH87 305 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 OR2T6Q8NHC8 308 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 TMEM186Q96B77 213 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 SRSF8Q9BRL6 282 aaKnown RBP4.09□□□□□ -1.75
FGD4-201ENST00000395740 DCTN5Q9BTE1 182 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 RNF7Q9UBF6 113 aa4.09□□□□□ -1.75
FGD4-201ENST00000395740 ZNF292O60281 2723 aa4.09□□□□□ -1.76
FGD4-201ENST00000395740 MUC6Q6W4X9 2439 aa4.09□□□□□ -1.76
FGD4-201ENST00000395740 DOCK7Q96N67 2140 aa4.09□□□□□ -1.76
FGD4-201ENST00000395740 IGHV1-18A0A0C4DH31 117 aa4.08□□□□□ -1.76
FGD4-201ENST00000395740 SERTM2A0A1B0GWG4 89 aa4.08□□□□□ -1.76
FGD4-201ENST00000395740 VWC2LB2RUY7 222 aa4.08□□□□□ -1.76
FGD4-201ENST00000395740 M0QZ24 198 aa4.08□□□□□ -1.76
FGD4-201ENST00000395740 SPINK4O60575 86 aa4.08□□□□□ -1.76
FGD4-201ENST00000395740 FAM87AP0C7U9 286 aa4.08□□□□□ -1.76
FGD4-201ENST00000395740 SAA1P0DJI8 122 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms