RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 TM2D1Q9BX74 207 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 BRCA1P38398 1863 aaKnown RBP12.35□□□□□ -0.43
CCDC50-201ENST00000392455 ZIC3O60481 467 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 CFHR5Q9BXR6 569 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 AMBPP02760 352 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 SORL1Q92673 2214 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 C8orf82Q6P1X6 216 aaPredicted RBP12.35□□□□□ -0.43
CCDC50-201ENST00000392455 SLC25A28Q96A46 364 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 PRR19A6NJB7 356 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 SNAI2O43623 268 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 C8orf46Q8TAG6 207 aa12.35□□□□□ -0.43
CCDC50-201ENST00000392455 TRBV7-1A0A0A6YYK4 115 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
CCDC50-201ENST00000392455 GPHA2Q96T91 129 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 SEC61GP60059 68 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 CLEC19AQ6UXS0 136 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 CHKB-CPT1BH3BT56 60 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 UBE2CO00762 179 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 PEAR1Q5VY43 1037 aaPredicted RBP12.34□□□□□ -0.43
CCDC50-201ENST00000392455 LY6G5BQ8NDX9 201 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 C1QCP02747 245 aa12.34□□□□□ -0.43
CCDC50-201ENST00000392455 TRBV5-3A0A0A0MS03 114 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 HELZP42694 1942 aaKnown RBP12.33□□□□□ -0.44
CCDC50-201ENST00000392455 YPEL1O60688 119 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 CDCP2Q5VXM1 449 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 BCL6BQ8N143 479 aaPredicted RBP12.33□□□□□ -0.44
CCDC50-201ENST00000392455 LYPD1Q8N2G4 141 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 YPEL2Q96QA6 119 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 PRTN3P24158 256 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 SRXN1Q9BYN0 137 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 F8W1H4 67 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 ZNF561-AS1K7EIQ3 104 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 ATP1A1-AS1Q5TC04 95 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 SLC25A45Q8N413 288 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 ST6GALNAC6Q969X2 333 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 FOXL1Q12952 345 aa12.33□□□□□ -0.44
CCDC50-201ENST00000392455 GAGE12BA1L429 117 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 PRCDQ00LT1 54 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 PAX8Q06710 450 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 UBE2V1Q13404 147 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 HCFC1P51610 2035 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 PDE6HQ13956 83 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 IGFBP2P18065 325 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 RCHY1Q96PM5 261 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 FBXL15Q9H469 300 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 TRAV13-2A0A0B4J235 113 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 A8MXK9 166 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 PPDPFLQ8WWR9 84 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 PRRC2AP48634 2157 aaKnown RBP12.32□□□□□ -0.44
CCDC50-201ENST00000392455 IGHG4P01861 327 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 TGIF1Q15583 401 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 SPATA31B1PQ5VZV4 182 aa12.32□□□□□ -0.44
CCDC50-201ENST00000392455 LIMS1P48059 325 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 MRPL27Q9P0M9 148 aaKnown RBP12.31□□□□□ -0.44
CCDC50-201ENST00000392455 RHODO00212 210 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 ZNF708P17019 499 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 IGFBP3P17936 291 aaPredicted RBP12.31□□□□□ -0.44
CCDC50-201ENST00000392455 IGHV3-48P01763 117 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 GZMMP51124 257 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 PRIMA1Q86XR5 153 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 IGHV3-23P01764 117 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 COX6A1P12074 109 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 USMG5Q96IX5 58 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 H3BTX0 84 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 PSG1P11464 419 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 LINC01545Q5VT33 79 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 FBLN5Q9UBX5 448 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 PILRAQ9UKJ1 303 aa12.31□□□□□ -0.44
CCDC50-201ENST00000392455 TMEM131Q92545 1883 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 MSGN1A6NI15 193 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 LHFPL6Q9Y693 200 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 NBASA2RRP1 2371 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 OOSP1A8MZH6 123 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 EML5Q05BV3 1969 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 ADMP35318 185 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 H2BFSP57053 126 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 TMEM141Q96I45 108 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 EVI2AP22794 236 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 SP7Q8TDD2 431 aaPredicted RBP12.3□□□□□ -0.44
CCDC50-201ENST00000392455 PSG8Q9UQ74 426 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 RNF114Q9Y508 228 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 TRAV8-3A0A0A6YYJ7 113 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 RPL23P62829 140 aaKnown RBP12.3□□□□□ -0.44
CCDC50-201ENST00000392455 RBM3P98179 157 aaKnown RBP12.3□□□□□ -0.44
CCDC50-201ENST00000392455 ST6GALNAC3Q8NDV1 305 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 LY96Q9Y6Y9 160 aa12.3□□□□□ -0.44
CCDC50-201ENST00000392455 LINC01560Q8TB33 94 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 SAP25Q8TEE9 199 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 IGHV3-66A0A0C4DH42 116 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 NCR2O95944 276 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 THAP8Q8NA92 274 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 ACYP1P07311 99 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 C7orf69Q9H7B7 122 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 TANC2Q9HCD6 1990 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 WNT2P09544 360 aa12.29□□□□□ -0.44
CCDC50-201ENST00000392455 SMIM20Q8N5G0 67 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms