RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 DAD1P61803 113 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 PVRIGQ6DKI7 326 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 TRAV13-1A0A0B4J241 112 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 COL8A2P25067 703 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 ZNF497Q6ZNH5 498 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 FGFBP3Q8TAT2 258 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 RNF166Q96A37 237 aaPredicted RBP11.67□□□□□ -0.54
TRIM13-202ENST00000378182 UCP3P55916 312 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 C1orf159Q96HA4 380 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 PSG8Q9UQ74 426 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 SPCS1Q9Y6A9 102 aa11.67□□□□□ -0.54
TRIM13-202ENST00000378182 TMEM14DPA8MWL7 114 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 J3QKU1 62 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 CA7P43166 264 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 PMS2P5A8MQ11 134 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 E9PQ18 207 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 YPEL1O60688 119 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 CACNG8Q8WXS5 425 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 YPEL2Q96QA6 119 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 SCN10AQ9Y5Y9 1956 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 MSRB2Q9Y3D2 182 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 M0R2P5 195 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
TRIM13-202ENST00000378182 IZUMO1RA6ND01 250 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 C10orf55Q5SWW7 151 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 SCRT1Q9BWW7 348 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 DOCK10Q96BY6 2186 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 OVOL1O14753 267 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
TRIM13-202ENST00000378182 FAM90A1Q86YD7 464 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
TRIM13-202ENST00000378182 RPUSD1Q9UJJ7 312 aaKnown RBP11.66□□□□□ -0.54
TRIM13-202ENST00000378182 LRRK1Q38SD2 2015 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 CACNA1DQ01668 2161 aa11.66□□□□□ -0.54
TRIM13-202ENST00000378182 HOXD3P31249 432 aaPredicted RBP11.65□□□□□ -0.54
TRIM13-202ENST00000378182 A0A087WWL8 130 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 LINC01590Q5TEZ4 76 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 FNDC4Q9H6D8 234 aaPredicted RBP11.65□□□□□ -0.54
TRIM13-202ENST00000378182 TSC2P49815 1807 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 PSPNO60542 156 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 STAG3L3P0CL85 134 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 C1orf122Q6ZSJ8 110 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 ALX4Q9H161 411 aaPredicted RBP11.65□□□□□ -0.54
TRIM13-202ENST00000378182 ARFGEF3Q5TH69 2177 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 IGHV1-3A0A0C4DH29 117 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 SSBP2P81877 361 aaPredicted RBP11.65□□□□□ -0.54
TRIM13-202ENST00000378182 FOXL1Q12952 345 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 TMEM155Q4W5P6 130 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 J3QW42 95 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 NCR2O95944 276 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 EPDR1Q9UM22 224 aa11.65□□□□□ -0.54
TRIM13-202ENST00000378182 PGPEP1LA6NFU8 196 aa11.65□□□□□ -0.55
TRIM13-202ENST00000378182 LYZL4Q96KX0 146 aa11.65□□□□□ -0.55
TRIM13-202ENST00000378182 NHP2Q9NX24 153 aaKnown RBP11.65□□□□□ -0.55
TRIM13-202ENST00000378182 XCL2Q9UBD3 114 aa11.65□□□□□ -0.55
TRIM13-202ENST00000378182 COL4A1P02462 1669 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 TMEM178BH3BS89 294 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 SS18Q15532 418 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 MRPL14Q6P1L8 145 aaKnown RBP11.64□□□□□ -0.55
TRIM13-202ENST00000378182 DTX1Q86Y01 620 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 ZDBF2Q9HCK1 2354 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 CACNA1GO43497 2377 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 WBP1Q96G27 269 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 PUSL1Q8N0Z8 303 aaKnown RBP11.64□□□□□ -0.55
TRIM13-202ENST00000378182 TRAV8-4A0A0B4J246 113 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 F8VVB4 439 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 F8VWA3 439 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 GGACTQ9BVM4 153 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 ZNF561-AS1K7EIQ3 104 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 PRCDQ00LT1 54 aa11.64□□□□□ -0.55
TRIM13-202ENST00000378182 NRXN2Q9P2S2 1712 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 DPM2O94777 84 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 PTPRDP23468 1912 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 GREB1LQ9C091 1923 aaPredicted RBP11.63□□□□□ -0.55
TRIM13-202ENST00000378182 IGHV1-8P0DP01 117 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 PLNP26678 52 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 TRBV7-1A0A0A6YYK4 115 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 ADMP35318 185 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 CLPSL2Q6UWE3 100 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 ANAPC10Q9UM13 185 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 SAA4P35542 130 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 ATP5IP56385 69 aaPredicted RBP11.63□□□□□ -0.55
TRIM13-202ENST00000378182 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
TRIM13-202ENST00000378182 ZNF114Q8NC26 417 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 MRPS18CQ9Y3D5 142 aaKnown RBP11.63□□□□□ -0.55
TRIM13-202ENST00000378182 IGKV1D-13A0A0B4J2D9 117 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 IGKV1-13P0DP09 117 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 IGLV3-21P80748 117 aaPredicted RBP11.63□□□□□ -0.55
TRIM13-202ENST00000378182 TM2D1Q9BX74 207 aa11.63□□□□□ -0.55
TRIM13-202ENST00000378182 Q5BKY6 102 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 PEF1Q9UBV8 284 aaKnown RBP11.62□□□□□ -0.55
TRIM13-202ENST00000378182 MYLKQ15746 1914 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 CADP27708 2225 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 Q8TAT8 98 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 DEFB131AP59861 70 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 RTBDNQ9BSG5 229 aaPredicted RBP11.62□□□□□ -0.55
TRIM13-202ENST00000378182 PPP1R3EQ9H7J1 279 aa11.62□□□□□ -0.55
TRIM13-202ENST00000378182 A0A1B0GV90 55 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms