RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SNAI2O43623 268 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 RNF5Q99942 180 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 SCRT1Q9BWW7 348 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 RNF114Q9Y508 228 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 TRAV3A0A0B4J244 114 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 A6NNC1 897 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 PLP1P60201 277 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 IFITM2Q01629 132 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 RPRMLQ8N4K4 120 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 RCHY1Q96PM5 261 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 NDUFS8O00217 210 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 RIPPLY3P57055 190 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 PRADC1Q9BSG0 188 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 EP300Q09472 2414 aaPredicted RBP11.17□□□□□ -0.62
GPC6-201ENST00000377047 IGHV3-73A0A0B4J1V6 119 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 MSMBP08118 114 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 RPL23P62829 140 aaKnown RBP11.17□□□□□ -0.62
GPC6-201ENST00000377047 SMIM13P0DJ93 91 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 BTCP35070 178 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 ID3Q02535 119 aa11.17□□□□□ -0.62
GPC6-201ENST00000377047 MRPL16Q9NX20 251 aaKnown RBP11.17□□□□□ -0.62
GPC6-201ENST00000377047 INTS1Q8N201 2190 aaKnown RBP11.17□□□□□ -0.62
GPC6-201ENST00000377047 NPIPB5A8MRT5 1133 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 A0A1W2PRE2 83 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 Q71RC1 249 aaPredicted RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 SLC25A39Q9BZJ4 359 aaPredicted RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 SEPSECSQ9HD40 501 aaKnown RBP11.16□□□□□ -0.62
GPC6-201ENST00000377047 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 FAM19A2Q8N3H0 131 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 A0A1B0GWJ7 208 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 TCF23Q7RTU1 214 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 CD28P10747 220 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 TREML4Q6UXN2 200 aa11.16□□□□□ -0.62
GPC6-201ENST00000377047 COTL1Q14019 142 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 Q6P435 159 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 ZNF98A6NK75 572 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 FCN3O75636 299 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 EXOC3-AS1Q8N2X6 119 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 USMG5Q96IX5 58 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 WDR83OSQ9Y284 106 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 TRGV1A0A0A0MS02 117 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
GPC6-201ENST00000377047 WFDC1Q9HC57 220 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 CNOT1A5YKK6 2376 aaKnown RBP11.15□□□□□ -0.62
GPC6-201ENST00000377047 IGHV3-53P01767 116 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 CD5P06127 495 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.628e-9■■■■■ 26.9
GPC6-201ENST00000377047 ASCL4Q6XD76 172 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 ST6GALNAC6Q969X2 333 aa11.15□□□□□ -0.62
GPC6-201ENST00000377047 FAM223BA6NKX1 122 aa11.15□□□□□ -0.63
GPC6-201ENST00000377047 PLA2G2CQ5R387 149 aa11.15□□□□□ -0.63
GPC6-201ENST00000377047 FAM223AQ8IWN6 122 aa11.15□□□□□ -0.63
GPC6-201ENST00000377047 PRSS33Q8NF86 280 aa11.15□□□□□ -0.63
GPC6-201ENST00000377047 COQ2Q96H96 371 aa11.15□□□□□ -0.63
GPC6-201ENST00000377047 VSIRQ9H7M9 311 aa11.15□□□□□ -0.63
GPC6-201ENST00000377047 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 LY6G6EA0A0G2JKS1 128 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 HGFACQ04756 655 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 TTC9CQ8N5M4 171 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 FAM169BQ8N8A8 192 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 BEND2Q8NDZ0 799 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 UBE2E2Q96LR5 201 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 PGPEP1Q9NXJ5 209 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 U3KQA8 63 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 KIF26BQ2KJY2 2108 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 SIGLEC9Q9Y336 463 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 GVINP1Q7Z2Y8 2422 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 C11orf68Q9H3H3 251 aaKnown RBP11.14□□□□□ -0.63
GPC6-201ENST00000377047 LY6G6FQ5SQ64 297 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 SPATA31B1PQ5VZV4 182 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 SPTBN2O15020 2390 aa11.14□□□□□ -0.63
GPC6-201ENST00000377047 A0A087WX48 190 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 PGPEP1LA6NFU8 196 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 MPZP25189 248 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 CYSLTR1Q9Y271 337 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 SIP14410 1827 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 LDLRAD4O15165 306 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 NUDT11Q96G61 164 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 GGTLC1Q9BX51 225 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 CACNA1GO43497 2377 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 H0YIZ8 118 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 PEF1Q9UBV8 284 aaKnown RBP11.13□□□□□ -0.63
GPC6-201ENST00000377047 SRRM4A7MD48 611 aaKnown RBP11.13□□□□□ -0.63
GPC6-201ENST00000377047 C14orf144Q96I85 54 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 RNF144BQ7Z419 303 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
GPC6-201ENST00000377047 CARHSP1Q9Y2V2 147 aaKnown RBP11.13□□□□□ -0.63
GPC6-201ENST00000377047 PLXNA3P51805 1871 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 LINC00473A8K010 186 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 F2Z2F3 143 aa11.12□□□□□ -0.63
GPC6-201ENST00000377047 K7ERU9 68 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms