RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 IGLC2P0DOY2 106 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 GCSHP23434 173 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 AMMECR1LQ6DCA0 310 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 TMEM136Q6ZRR5 245 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 CIARTQ8N365 385 aaPredicted RBP11.17□□□□□ -0.62
SGMS1-202ENST00000361781 C18orf32Q8TCD1 76 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 RPP21Q9H633 154 aaKnown RBP11.17□□□□□ -0.62
SGMS1-202ENST00000361781 OR10J3Q5JRS4 329 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 MRPL32Q9BYC8 188 aaKnown RBP11.17□□□□□ -0.62
SGMS1-202ENST00000361781 EPDR1Q9UM22 224 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 PMS2P5A8MQ11 134 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 TWIST1Q15672 202 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 Q9H3A6 140 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
SGMS1-202ENST00000361781 C2CD3Q4AC94 2353 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 DSPP15924 2871 aaKnown RBP11.16□□□□□ -0.62
SGMS1-202ENST00000361781 LYNX1G3V0Z9 82 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 LYNX1P0DP58 116 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 LOXL4Q96JB6 756 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 RALYQ9UKM9 306 aaKnown RBP11.16□□□□□ -0.62
SGMS1-202ENST00000361781 FAM90A27PA6NNH2 459 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 SS18L1O75177 396 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-202ENST00000361781 CKS2P33552 79 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 FNDC4Q9H6D8 234 aaPredicted RBP11.16□□□□□ -0.62
SGMS1-202ENST00000361781 C16orf97H3BN30 126 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 IL4P05112 153 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 SPRNQ5BIV9 151 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 UTF1Q5T230 341 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 MBNL2Q5VZF2 373 aaKnown RBP11.16□□□□□ -0.62
SGMS1-202ENST00000361781 S100A7AQ86SG5 101 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 NDFIP1Q9BT67 221 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 C19orf24Q9BVV8 132 aa11.16□□□□□ -0.62
SGMS1-202ENST00000361781 KIR2DL5BA0A0G2JN68 375 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 KIR2DL5BA0A0G2JPC4 375 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 LINC00614P0C842 121 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 KIR2DL5AQ8N109 375 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 OSR1Q8TAX0 266 aaPredicted RBP11.15□□□□□ -0.62
SGMS1-202ENST00000361781 IGHV3-49A0A0A0MS15 119 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 LIPFP07098 398 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 WNT2P09544 360 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 BRWD1-AS2P59051 145 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 RPRMLQ8N4K4 120 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 THYN1Q9P016 225 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 KIAA1549Q9HCM3 1950 aa11.15□□□□□ -0.62
SGMS1-202ENST00000361781 CSPG4Q6UVK1 2322 aa11.15□□□□□ -0.63
SGMS1-202ENST00000361781 SRRM4A7MD48 611 aaKnown RBP11.14□□□□□ -0.63
SGMS1-202ENST00000361781 IGLL1P15814 213 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 KRTAP27-1Q3LI81 207 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
SGMS1-202ENST00000361781 FOXA2Q9Y261 457 aaPredicted RBP11.14□□□□□ -0.63
SGMS1-202ENST00000361781 Q0VG73 95 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 MORN5Q5VZ52 161 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 TEX43Q6ZNM6 134 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 C11orf53Q8IXP5 236 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 C15orf65H3BRN8 121 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 PDLIM4P50479 330 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 TMUB1Q9BVT8 246 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 TP73-AS1Q9UF72 201 aa11.14□□□□□ -0.63
SGMS1-202ENST00000361781 M0R296 226 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 MDS2Q8NDY4 140 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 OR10AG1Q8NH19 301 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 Q8TCH9 128 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 KLK15Q9H2R5 256 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 RPUSD1Q9UJJ7 312 aaKnown RBP11.13□□□□□ -0.63
SGMS1-202ENST00000361781 TMEM189A5PLL7 270 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 RIPPLY3P57055 190 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 SSBP2P81877 361 aaPredicted RBP11.13□□□□□ -0.63
SGMS1-202ENST00000361781 RBPMS2Q6ZRY4 209 aaKnown RBP11.13□□□□□ -0.63
SGMS1-202ENST00000361781 GUCD1Q96NT3 240 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 A0A1B0GUT8 65 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 IGHV1-46P01743 117 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
SGMS1-202ENST00000361781 SFTPCP11686 197 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 SPACA3Q8IXA5 215 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 CACNG8Q8WXS5 425 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 SCNM1Q9BWG6 230 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 GP6Q9HCN6 339 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 CUL9Q8IWT3 2517 aa11.13□□□□□ -0.63
SGMS1-202ENST00000361781 TCRBV4S1A1TA0A5B7 111 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 A6NDN8 102 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 H3BUT2 72 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 PSG1P11464 419 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
SGMS1-202ENST00000361781 TECTAO75443 2155 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 TNRC18O15417 2968 aaPredicted RBP11.12□□□□□ -0.63
SGMS1-202ENST00000361781 DCHS1Q96JQ0 3298 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 PROP1O75360 226 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 CD40P25942 277 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 KLF17Q5JT82 389 aaPredicted RBP11.12□□□□□ -0.63
SGMS1-202ENST00000361781 TIMM23BQ5SRD1 257 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 ZC2HC1AQ96GY0 325 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 IGHV3-66A0A0C4DH42 116 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 C7orf71A4D174 169 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 S100A4P26447 101 aaKnown RBP11.12□□□□□ -0.63
SGMS1-202ENST00000361781 DIAPH2-AS1Q14236 149 aa11.12□□□□□ -0.63
SGMS1-202ENST00000361781 OR2T8A6NH00 312 aa11.11□□□□□ -0.63
SGMS1-202ENST00000361781 IGKV3-15P01624 115 aa11.11□□□□□ -0.63
SGMS1-202ENST00000361781 CRYABP02511 175 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms