RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 OR2T8A6NH00 312 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 IGHV1-2P23083 117 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 CEACAM3P40198 252 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 ARF6P62330 175 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 PAX2Q02962 417 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 DAZAP2Q15038 168 aaPredicted RBP10.33□□□□□ -0.76
BDNF-202ENST00000356660 MUC21Q5SSG8 566 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 PRNTQ86SH4 94 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 TP53TG3Q9ULZ0 132 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 CORTO00230 105 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 MOSP00540 346 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 PPBPP02775 128 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 NMUP48645 174 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 TM4SF20Q53R12 229 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 WDR82Q6UXN9 313 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 FNDC4Q9H6D8 234 aaPredicted RBP10.33□□□□□ -0.76
BDNF-202ENST00000356660 PEF1Q9UBV8 284 aaKnown RBP10.33□□□□□ -0.76
BDNF-202ENST00000356660 TLN2Q9Y4G6 2542 aa10.33□□□□□ -0.76
BDNF-202ENST00000356660 PMS2P5A8MQ11 134 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 DKK1O94907 266 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 AREGP15514 252 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 C9orf106Q8NAJ2 232 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 SNRNP40Q96DI7 357 aaKnown RBP10.32□□□□□ -0.76
BDNF-202ENST00000356660 GEMIN7Q9H840 131 aaKnown RBP10.32□□□□□ -0.76
BDNF-202ENST00000356660 SS18L2Q9UHA2 77 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 JPT1Q9UK76 154 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 RNF114Q9Y508 228 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 CPAMD8Q8IZJ3 1885 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 PEX7O00628 323 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 SRSF6Q13247 344 aaKnown RBP10.32□□□□□ -0.76
BDNF-202ENST00000356660 FAM216BQ8N7L0 139 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 FAM168AQ92567 244 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 HSPB8Q9UJY1 196 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 PLXNB1O43157 2135 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.32□□□□□ -0.76
BDNF-202ENST00000356660 HLA-DRB1P01911 266 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 HBBP68871 147 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 TMEM116Q8NCL8 245 aa10.32□□□□□ -0.76
BDNF-202ENST00000356660 TEX50A0A1B0GTY4 177 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 OR2J3O76001 311 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
BDNF-202ENST00000356660 NUP35Q8NFH5 326 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 OR4F17Q8NGA8 305 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 SFXN3Q9BWM7 321 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 RAB1BQ9H0U4 201 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 F11RQ9Y624 299 aaKnown RBP10.31□□□□□ -0.76
BDNF-202ENST00000356660 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 IGKV3D-15A0A087WSY6 115 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 IGHV1-69-2A0A0G2JMI3 117 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 C15orf61A6NNL5 157 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 NDUFB8O95169 186 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 AAMDCQ9H7C9 122 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 TP73-AS1Q9UF72 201 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 OR52E5Q8NH55 327 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 GRAMD2BQ96HH9 432 aa10.31□□□□□ -0.76
BDNF-202ENST00000356660 LOC105371242A0A075B767 164 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 NTN3O00634 580 aaPredicted RBP10.3□□□□□ -0.76
BDNF-202ENST00000356660 S100A4P26447 101 aaKnown RBP10.3□□□□□ -0.76
BDNF-202ENST00000356660 WDR31Q8NA23 367 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 ZNF714Q96N38 554 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 NDFIP1Q9BT67 221 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 SAA2-SAA4A0A096LPE2 208 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 GGTLC3B5MD39 225 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 SAA2P0DJI9 122 aaPredicted RBP10.3□□□□□ -0.76
BDNF-202ENST00000356660 LINC00305Q7Z4B0 112 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 LINC01560Q8TB33 94 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 HERV-K104P63124 156 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 SMIM20Q8N5G0 67 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 ZC2HC1AQ96GY0 325 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 SAP30O75446 220 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 FAM87AP0C7U9 286 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 PNKDQ8N490 385 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 C5orf30Q96GV9 206 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 IFI27L2Q9H2X8 130 aa10.3□□□□□ -0.76
BDNF-202ENST00000356660 MRPS16Q9Y3D3 137 aaKnown RBP10.3□□□□□ -0.76
BDNF-202ENST00000356660 WFDC3Q8IUB2 231 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 SPACA3Q8IXA5 215 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 A0A1W2PRE2 83 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 H3BUT2 72 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 CDX4O14627 284 aaPredicted RBP10.29□□□□□ -0.76
BDNF-202ENST00000356660 ESDP10768 282 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 AZU1P20160 251 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 SRSF12Q8WXF0 261 aaKnown RBP10.29□□□□□ -0.76
BDNF-202ENST00000356660 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 A6NDN8 102 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 IQCF6A8MYZ5 107 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 YPEL1O60688 119 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 CD177Q8N6Q3 437 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 YPEL2Q96QA6 119 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 AP5S1Q9NUS5 200 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 THYN1Q9P016 225 aa10.29□□□□□ -0.76
BDNF-202ENST00000356660 C7orf71A4D174 169 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 LIPFP07098 398 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 PERPQ96FX8 193 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 PIMREGQ9BSJ6 248 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 S4R3C0 116 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 CHD8Q9HCK8 2581 aa10.28□□□□□ -0.76
BDNF-202ENST00000356660 GPR183P32249 361 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms