RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 IGHV3-11P01762 117 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 GATA3P23771 443 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 CACNG7P62955 275 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 TEX38Q6PEX7 206 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 SLC25A48Q6ZT89 311 aaKnown RBP10.54□□□□□ -0.72
DNMT1-201ENST00000340748 TMEM101Q96IK0 257 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 GSN-AS1Q9NRJ2 163 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 ABCA4P78363 2273 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 SERF1AO75920 110 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 RTTNQ86VV8 2226 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 TMEM167AQ8TBQ9 72 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 C18orf15Q96N68 181 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 LOC102724200A0A096LPH7 203 aaPredicted RBP10.54□□□□□ -0.72
DNMT1-201ENST00000340748 GCSAMLQ5JQS6 135 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 MINOS1Q5TGZ0 78 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 MINOS1-NBL1R4GNA1 71 aa10.54□□□□□ -0.72
DNMT1-201ENST00000340748 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 TSKUQ8WUA8 353 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 GAFA1Q96PS6 74 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 FOXC2Q99958 501 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 MBNL3Q9NUK0 354 aaKnown RBP10.53□□□□□ -0.72
DNMT1-201ENST00000340748 TRBV24-1A0A075B6N3 115 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 PSMB11A5LHX3 300 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 DUSP14O95147 198 aaKnown RBP10.53□□□□□ -0.72
DNMT1-201ENST00000340748 TMEM170BQ5T4T1 132 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 NRN1Q9NPD7 142 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 LEMD1Q68G75 181 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 FAM71F2Q6NXP2 309 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 TTC9CQ8N5M4 171 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 PRDM13Q9H4Q3 707 aa10.53□□□□□ -0.72
DNMT1-201ENST00000340748 IGHV3OR16-8A0A075B7F1 116 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 TRAV21A0A0B4J279 112 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 H3BUX3 64 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 UBE2CO00762 179 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 CD24P25063 80 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 TPTE2P1Q5T6R2 138 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 RNF144BQ7Z419 303 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 ITLN2Q8WWU7 325 aaPredicted RBP10.52□□□□□ -0.72
DNMT1-201ENST00000340748 CLDN16Q9Y5I7 305 aa10.52□□□□□ -0.72
DNMT1-201ENST00000340748 IGHV1-3A0A0C4DH29 117 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 LILRA1O75019 489 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 PPBPP02775 128 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-201ENST00000340748 TRGV9Q99603 122 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-201ENST00000340748 TRAV8-6A0A0B4J262 113 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 MLNRO43193 412 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BKO60814 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 SAP30O75446 220 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BJP06899 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BOP23527 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BBP33778 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BDP58876 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BCP62807 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST2H2BEQ16778 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BHQ93079 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 MGST2Q99735 147 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BNQ99877 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 HIST1H2BMQ99879 126 aa10.52□□□□□ -0.73
DNMT1-201ENST00000340748 E9PQ18 207 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 M0R1W7 72 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 SELLP14151 372 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 FAM19A2Q8N3H0 131 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 SPOCK3Q9BQ16 436 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 MUC21A0A0G2JKD1 596 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 MUC21A0A140T8X8 626 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 H0YJW9 148 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 SUMO2P61956 95 aaKnown RBP10.51□□□□□ -0.73
DNMT1-201ENST00000340748 MUC21Q5SSG8 566 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 COQ2Q96H96 371 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 H3BRM9 83 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 OVOL1O14753 267 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 CHCHD1Q96BP2 118 aaKnown RBP10.51□□□□□ -0.73
DNMT1-201ENST00000340748 AGMATQ9BSE5 352 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 FAM215AQ9Y5M1 114 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 FOXL1Q12952 345 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 NBASA2RRP1 2371 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 MDC1Q14676 2089 aaKnown RBP10.51□□□□□ -0.73
DNMT1-201ENST00000340748 GRNP28799 593 aaKnown RBP10.51□□□□□ -0.73
DNMT1-201ENST00000340748 PLAURQ03405 335 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 C14orf144Q96I85 54 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 LINC01587Q99440 93 aa10.51□□□□□ -0.73
DNMT1-201ENST00000340748 F2Z2F3 143 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 PAX8Q06710 450 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 TMEM219Q86XT9 240 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 OR5AN1Q8NGI8 311 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 LY96Q9Y6Y9 160 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 A0A1B0GV90 55 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 TMEM50AO95807 157 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 KLRD1Q13241 179 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 IGKV1D-17A0A075B6S4 117 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 TRAV41A0A0B4J266 112 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 A0A1B0GWJ7 208 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 ITGB1BP1O14713 200 aa10.5□□□□□ -0.73
DNMT1-201ENST00000340748 NXT2Q9NPJ8 142 aaKnown RBP10.5□□□□□ -0.73
DNMT1-201ENST00000340748 COLCA2A8K830 154 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms