RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 UBAC2Q8NBM4 344 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 SRSF8Q9BRL6 282 aaKnown RBP12.78□□□□□ -0.36
SHOX-201ENST00000334060 TMEM231Q9H6L2 316 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 ZNF580Q9UK33 172 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 WNK1Q9H4A3 2382 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 IGKV1OR2-108A0A075B7D4 117 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 CXorf65A6NEN9 183 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 ADARB2-AS1A8MUL3 147 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 PPP5D1E7EU14 171 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 NDUFS6O75380 124 aaKnown RBP12.78□□□□□ -0.36
SHOX-201ENST00000334060 TSPAN15O95858 294 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 RPL12P30050 165 aaKnown RBP12.78□□□□□ -0.36
SHOX-201ENST00000334060 CLINT1Q14677 625 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 TEX38Q6PEX7 206 aa12.78□□□□□ -0.36
SHOX-201ENST00000334060 P2RY1P47900 373 aa12.77□□□□□ -0.37
SHOX-201ENST00000334060 RPL23AP62750 156 aaKnown RBP12.77□□□□□ -0.37
SHOX-201ENST00000334060 SPATA3Q8NHX4 192 aa12.77□□□□□ -0.37
SHOX-201ENST00000334060 MYOZ3Q8TDC0 251 aa12.77□□□□□ -0.37
SHOX-201ENST00000334060 CIB3Q96Q77 187 aaPredicted RBP12.77□□□□□ -0.37
SHOX-201ENST00000334060 C2orf88Q9BSF0 95 aa12.77□□□□□ -0.37
SHOX-201ENST00000334060 A0A087WWC5 75 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 SEC11BP0C7V7 166 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 TAS2R30P59541 319 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 RELQ04864 619 aaPredicted RBP12.76□□□□□ -0.37
SHOX-201ENST00000334060 ZNF491Q8N8L2 437 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 IGHV3OR16-8A0A075B7F1 116 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 CD69Q07108 199 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 FOXE3Q13461 319 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 GAMTQ14353 236 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 CLEC19AQ6UXS0 136 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 OR5C1Q8NGR4 320 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 RAB24Q969Q5 203 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 ACY3Q96HD9 319 aa12.76□□□□□ -0.37
SHOX-201ENST00000334060 OR2T8A6NH00 312 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 RAB4AP20338 218 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 SULT1A1P50225 295 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 RND2P52198 227 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 SLC35B1P78383 322 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 TMEM182Q6ZP80 229 aaPredicted RBP12.75□□□□□ -0.37
SHOX-201ENST00000334060 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 RNF152Q8N8N0 203 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 TMEM68Q96MH6 324 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 CHRDL1Q9BU40 450 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 SLC35B3Q9H1N7 401 aa12.75□□□□□ -0.37
SHOX-201ENST00000334060 BORCS7-ASMTA0A0B4J1R7 106 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 M0R036 132 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 GPR183P32249 361 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 SLC38A11Q08AI6 406 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 KLK9Q2XQG4 91 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 NECAP1Q8NC96 275 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 ZNF502Q8TBZ5 544 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 NPIPB3Q92617 1050 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 C14orf144Q96I85 54 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 ARV1Q9H2C2 271 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 FBXL17Q9UF56 701 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 KLK9Q9UKQ9 250 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 ANK2Q01484 3957 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 IGKV1D-37A0A075B6S9 117 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 ELANEP08246 267 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 EDN2P20800 178 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 GATA2P23769 480 aaPredicted RBP12.74□□□□□ -0.37
SHOX-201ENST00000334060 ADMP35318 185 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 FOXL1Q12952 345 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 GUK1Q16774 197 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 NSUN5P1Q3KNT7 163 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 Q6ZRG5 221 aa12.74□□□□□ -0.37
SHOX-201ENST00000334060 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
SHOX-201ENST00000334060 SMCO3A2RU48 225 aa12.73□□□□□ -0.37
SHOX-201ENST00000334060 OR4X2Q8NGF9 303 aa12.73□□□□□ -0.37
SHOX-201ENST00000334060 SELENOKQ9Y6D0 94 aa12.73□□□□□ -0.37
SHOX-201ENST00000334060 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 CLEC3BP05452 202 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 SUB1P53999 127 aaKnown RBP eCLIP12.72□□□□□ -0.37
SHOX-201ENST00000334060 ZNF90Q03938 601 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 ATP5G2Q06055 141 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 ACSM6Q6P461 480 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 C21orf62Q9NYP8 219 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 IGHV4OR15-8A0A075B7B6 117 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 A0A087WW49 117 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 OR2C1O95371 312 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 DDTP30046 118 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 RAB11AP62491 216 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 PYY3Q5JQD4 70 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 OR10P1Q8NGE3 313 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
SHOX-201ENST00000334060 YPEL4Q96NS1 127 aa12.72□□□□□ -0.37
SHOX-201ENST00000334060 UMAD1C9J7I0 102 aa12.71□□□□□ -0.37
SHOX-201ENST00000334060 PPP1R2P9O14990 202 aa12.71□□□□□ -0.37
SHOX-201ENST00000334060 RUNX1Q01196 453 aa12.71□□□□□ -0.37
SHOX-201ENST00000334060 TIGITQ495A1 244 aa12.71□□□□□ -0.37
SHOX-201ENST00000334060 TREML4Q6UXN2 200 aa12.71□□□□□ -0.37
SHOX-201ENST00000334060 FAM24BQ8N5W8 94 aa12.71□□□□□ -0.37
SHOX-201ENST00000334060 H3BUA1 57 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 BMPR1BO00238 502 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 IGKV1-17P01599 117 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 Q56UQ5 140 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 MRPL41Q8IXM3 137 aaKnown RBP12.7□□□□□ -0.38
SHOX-201ENST00000334060 CITED1Q99966 193 aa12.7□□□□□ -0.38
SHOX-201ENST00000334060 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms