RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 MT-CO2P00403 227 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 INSP01308 110 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 CFC1BP0CG36 223 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 GATA2P23769 480 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-201ENST00000323441 RPL5P46777 297 aaKnown RBP1.83□□□□□ -2.12
HIF1A-201ENST00000323441 MT1HP80294 61 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 RAB11BQ15907 218 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 BSXQ3C1V8 233 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 HSD17B12Q53GQ0 312 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 CMTM1Q8IZ96 169 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 SPAG16Q8N0X2 631 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 UBAC2Q8NBM4 344 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 FAM3DQ96BQ1 224 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 TSC22D3Q99576 134 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 GFI1Q99684 422 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 HINT2Q9BX68 163 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 KCNK15Q9H427 330 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 PLAC8Q9NZF1 115 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 CLEC2DQ9UHP7 191 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 DAPK2Q9UIK4 370 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 IGKV1D-8A0A087WSZ0 117 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 TRAV30A0A087WSZ9 112 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 IGHV3-66A0A0C4DH42 116 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 TMEM272A0A1B0GTI8 110 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 GSTZ1O43708 216 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-201ENST00000323441 NUP62P37198 522 aaPredicted RBP1.83□□□□□ -2.12
HIF1A-201ENST00000323441 CRYBA4P53673 196 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 ERVK-16P61578 105 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 RPL11P62913 178 aaKnown RBP1.83□□□□□ -2.12
HIF1A-201ENST00000323441 TRAM1Q15629 374 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 C2orf76Q3KRA6 126 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 LINC01620Q4KN68 170 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 OR2B11Q5JQS5 317 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 FAM78BQ5VT40 261 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 REG3GQ6UW15 175 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 Q8N976 141 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 OR51B2Q9Y5P1 312 aa1.83□□□□□ -2.12
HIF1A-201ENST00000323441 SYNE2Q8WXH0 6885 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 IGHV3OR16-12A0A075B7B8 117 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ATP8B1O43520 1251 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 CLN5O75503 358 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SCGNO76038 276 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 IGKV1-17P01599 117 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 HNRNPCP07910 306 aaKnown RBP eCLIP1.82□□□□□ -2.124e-7■■■■□ 21.1
HIF1A-201ENST00000323441 PSMA1P25786 263 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 TALDO1P37837 337 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 HSPA13P48723 471 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 DEFB1P60022 68 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 C4orf46Q504U0 113 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 HACD4Q5VWC8 232 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 NANOGP1Q8N7R0 232 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 C11orf72Q8NBR9 251 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 DMBX1Q8NFW5 382 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 OR4X1Q8NH49 305 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 OR52E5Q8NH55 327 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 C20orf173Q96LM9 149 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 TM2D2Q9BX73 214 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 FAM107BQ9H098 131 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 PLCXD1Q9NUJ7 323 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 TAS2R8Q9NYW2 309 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 DOK5Q9P104 306 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ANXA10Q9UJ72 324 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SPATA2Q9UM82 520 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 METTL21EPA6NDL7 271 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ARL6IP5O75915 188 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SNAPC5O75971 98 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 FCER2P06734 321 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 NFYAP23511 347 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 PSMB9P28065 219 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 YPEL3P61236 119 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ST3GAL4Q11206 333 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SMN1Q16637 294 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ZFP1Q6P2D0 407 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SIGLEC15Q6ZMC9 328 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SDIM1Q6ZPB5 146 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 LGALS14Q8TCE9 139 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 MOB3AQ96BX8 217 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 C7orf50Q9BRJ6 194 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 C9orf16Q9BUW7 83 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 WDR12Q9GZL7 423 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 PLGRKTQ9HBL7 147 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 NOP10Q9NPE3 64 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 FKBP14Q9NWM8 211 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 KIF25-AS1Q9Y6Z4 181 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 IGHV3-21A0A0B4J1V1 117 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 K7EQD1 137 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ISLRO14498 428 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 MYL12BO14950 172 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SPINK4O60575 86 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 F2RP25116 425 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ID1P41134 155 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 SCAND1P57086 179 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ERHP84090 104 aaKnown RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 OR5I1Q13606 314 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 FHL2Q14192 279 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 ZIK1Q3SY52 487 aaPredicted RBP1.82□□□□□ -2.12
HIF1A-201ENST00000323441 C9orf163Q8N9P6 203 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 CCDC197Q8NCU1 140 aa1.82□□□□□ -2.12
HIF1A-201ENST00000323441 OR1S2Q8NGQ3 325 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms