RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 LRRK2Q5S007 2527 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 WNT2P09544 360 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 AREGP15514 252 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 PDLIM4P50479 330 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 TANC2Q9HCD6 1990 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 HAX1O00165 279 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 FOLR2P14207 255 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 HIST1H1AQ02539 215 aaPredicted RBP13.53□□□□□ -0.24
CLIP4-201ENST00000320081 UQCR10Q9UDW1 63 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 A0A0G2JNJ9 132 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 C9JCJ5 164 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 ZNF138P52744 262 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 TMEM219Q86XT9 240 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 TEX45Q8NA69 505 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 Q9UFV3 132 aa13.53□□□□□ -0.24
CLIP4-201ENST00000320081 EML6Q6ZMW3 1958 aa13.52□□□□□ -0.24
CLIP4-201ENST00000320081 PMS2P5A8MQ11 134 aa13.52□□□□□ -0.24
CLIP4-201ENST00000320081 PRCDQ00LT1 54 aa13.52□□□□□ -0.24
CLIP4-201ENST00000320081 FGF23Q9GZV9 251 aaPredicted RBP13.52□□□□□ -0.24
CLIP4-201ENST00000320081 KLF2Q9Y5W3 355 aaPredicted RBP13.52□□□□□ -0.24
CLIP4-201ENST00000320081 POLQO75417 2590 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 APOHP02749 345 aaPredicted RBP13.52□□□□□ -0.25
CLIP4-201ENST00000320081 STAG3L2P0CL84 134 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 STAG3L3P0CL85 134 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 ASCL4Q6XD76 172 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 RBPMS2Q6ZRY4 209 aaKnown RBP13.52□□□□□ -0.25
CLIP4-201ENST00000320081 DMRTC2Q8IXT2 367 aaPredicted RBP13.52□□□□□ -0.25
CLIP4-201ENST00000320081 TM4SF5O14894 197 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 IGHV2-70P01814 119 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 SCRT1Q9BWW7 348 aa13.52□□□□□ -0.25
CLIP4-201ENST00000320081 M0R3E3 92 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 MYOZ3Q8TDC0 251 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 TMEM170AQ8WVE7 144 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 MRPL32Q9BYC8 188 aaKnown RBP13.51□□□□□ -0.25
CLIP4-201ENST00000320081 TRAV8-6A0A0B4J262 113 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 TRGV3P03979 118 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 TMEM97Q5BJF2 176 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 FN1P02751 2386 aaKnown RBP13.51□□□□□ -0.25
CLIP4-201ENST00000320081 A6NNC1 897 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 GPR82Q96P67 336 aa13.51□□□□□ -0.25
CLIP4-201ENST00000320081 LSM4Q9Y4Z0 139 aaKnown RBP13.51□□□□□ -0.25
CLIP4-201ENST00000320081 TRBV20OR9-2A0A075B6H5 130 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 CIARTQ8N365 385 aaPredicted RBP13.5□□□□□ -0.25
CLIP4-201ENST00000320081 C11orf44Q8N8P7 122 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 PHLDA3Q9Y5J5 127 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 NUDT3O95989 172 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 NPPCP23582 126 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 ZNF726P1Q15940 193 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 SFTA2Q6UW10 78 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 NPIPB5A8MRT5 1133 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 RPL15P61313 204 aaKnown RBP13.5□□□□□ -0.25
CLIP4-201ENST00000320081 ALPK3Q96L96 1907 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 GPX1P07203 203 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 ZNF672Q499Z4 452 aaPredicted RBP13.5□□□□□ -0.25
CLIP4-201ENST00000320081 ELOVL5Q9NYP7 299 aa13.5□□□□□ -0.25
CLIP4-201ENST00000320081 SLC25A34Q6PIV7 304 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 DUX5Q96PT3 197 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 K7EM74 188 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 HLA-DRB1P01911 266 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 PSG1P11464 419 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 LYL1P12980 280 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 CFPP27918 469 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 ZNF134P52741 427 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 ADIPOQQ15848 244 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 CACNG8Q8WXS5 425 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 A0A1B0GUT8 65 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 MEF2CQ06413 473 aaPredicted RBP13.49□□□□□ -0.25
CLIP4-201ENST00000320081 CHD3Q12873 2000 aaKnown RBP13.49□□□□□ -0.25
CLIP4-201ENST00000320081 HAPLN4Q86UW8 402 aa13.49□□□□□ -0.25
CLIP4-201ENST00000320081 TRBV24-1A0A075B6N3 115 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 DIAPH2-AS1Q14236 149 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.48□□□□□ -0.25
CLIP4-201ENST00000320081 ARPC1AQ92747 370 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 C19orf24Q9BVV8 132 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 M0QZK8 103 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 BMI1P35226 326 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 UCNP55089 124 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 TMEM70Q9BUB7 260 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 TMEM160Q9NX00 188 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 EPDR1Q9UM22 224 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 OR10J6PQ8NGY7 276 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 Q8TAT8 98 aa13.48□□□□□ -0.25
CLIP4-201ENST00000320081 MBNL3Q9NUK0 354 aaKnown RBP13.48□□□□□ -0.25
CLIP4-201ENST00000320081 COL8A2P25067 703 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 KLRB1Q12918 225 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 FBLN7Q53RD9 439 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
CLIP4-201ENST00000320081 FASNP49327 2511 aaKnown RBP13.47□□□□□ -0.25
CLIP4-201ENST00000320081 CNTFRP26992 372 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 ZNF114Q8NC26 417 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 RNF125Q96EQ8 232 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 NAA38Q9BRA0 125 aaKnown RBP13.47□□□□□ -0.25
CLIP4-201ENST00000320081 PLA2G2EQ9NZK7 142 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 DSCAML1Q8TD84 2053 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 TCRBV4S1A1TA0A5B7 111 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 BRD3OSQ6XYD6 125 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 OR10AG1Q8NH19 301 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 GAFA1Q96PS6 74 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 SPRNQ5BIV9 151 aa13.47□□□□□ -0.25
CLIP4-201ENST00000320081 H3BVH4 76 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms