RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 CENPWQ5EE01 88 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 IGLV3-9A0A075B6K5 115 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 SCO2A0A1W2PP80 73 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 LINC00473A8K010 186 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 PMS2P5A8MQ11 134 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 TRGC1P0CF51 173 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 NMUP48645 174 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 IGF2-ASQ6U949 168 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 C19orf35Q6ZS72 473 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 C18orf12Q96KH6 178 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 RCHY1Q96PM5 261 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 RPL13AP40429 203 aaKnown RBP7.31□□□□□ -1.24
CTC1-201ENST00000315684 GCSAMLQ5JQS6 135 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 TMEM158Q8WZ71 300 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 GPR61Q9BZJ8 451 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 IGLV2-23P01705 113 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 TRBV7-1A0A0A6YYK4 115 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 PSG1P11464 419 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 HOXB4P17483 251 aaPredicted RBP7.31□□□□□ -1.24
CTC1-201ENST00000315684 TDGF1P3P51864 188 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 TMEM42Q69YG0 159 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 ZNF660Q6AZW8 331 aaPredicted RBP7.31□□□□□ -1.24
CTC1-201ENST00000315684 LCN12Q6JVE5 192 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 DHRS11Q6UWP2 260 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 BCL6BQ8N143 479 aaPredicted RBP7.31□□□□□ -1.24
CTC1-201ENST00000315684 EXOC3-AS1Q8N2X6 119 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 OR11H4Q8NGC9 324 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 DKK4Q9UBT3 224 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 H2BFSP57053 126 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 SAMD13Q5VXD3 122 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 WDR86Q86TI4 376 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 LURAP1LQ8IV03 231 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 C18orf15Q96N68 181 aa7.31□□□□□ -1.24
CTC1-201ENST00000315684 CD74P04233 296 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 EFNB3Q15768 340 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 C2orf68Q2NKX9 166 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 SPSB4Q96A44 273 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 KIR2DL4Q99706 377 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 C22orf46C9J442 243 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 AGAP20933 346 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 IGFL2Q6UWQ7 119 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 FAM169BQ8N8A8 192 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 GATAD1Q8WUU5 269 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 SPOCK3Q9BQ16 436 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 MAP1LC3AQ9H492 121 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 MMP23AO75900 390 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 PRCDQ00LT1 54 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 FBLIM1Q8WUP2 373 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 CHAC2Q8WUX2 184 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 CGB3P0DN86 165 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 ATP5G3P48201 142 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 Q5BKY6 102 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 TCTEX1D4Q5JR98 221 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 OR10J3Q5JRS4 329 aa7.3□□□□□ -1.24
CTC1-201ENST00000315684 LOXP28300 417 aaPredicted RBP7.29□□□□□ -1.24
CTC1-201ENST00000315684 NR2C2APQ86WQ0 139 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 VAMP8Q9BV40 100 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 SRRM4A7MD48 611 aaKnown RBP7.29□□□□□ -1.24
CTC1-201ENST00000315684 SEC11BP0C7V7 166 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 UCP1P25874 307 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 OR4C5Q8NGB2 326 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 NPIPB5A8MRT5 1133 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 SAPCD1Q5SSQ6 148 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 KNCNA6PVL3 124 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 PEX7O00628 323 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 PVRIGQ6DKI7 326 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 NPDC1Q9NQX5 325 aaPredicted RBP7.29□□□□□ -1.24
CTC1-201ENST00000315684 C5orf52A6NGY3 159 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 CCL24O00175 119 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 USMG5Q96IX5 58 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 GFI1Q99684 422 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 IGHV3-16A0A0C4DH30 117 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 PHOX2AO14813 284 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 RPLP1P05386 114 aaKnown RBP7.29□□□□□ -1.24
CTC1-201ENST00000315684 EVI2AP22794 236 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 RNF182Q8N6D2 247 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 Q8TAT8 98 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 PLSCR2Q9NRY7 297 aa7.29□□□□□ -1.24
CTC1-201ENST00000315684 NOTCH2Q04721 2471 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 A0A087WX48 190 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 SLC17A3O00476 420 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 MEF2BQ02080 365 aaPredicted RBP7.28□□□□□ -1.24
CTC1-201ENST00000315684 REC114Q7Z4M0 266 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 LRTM2Q8N967 370 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 OOSP1A8MZH6 123 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 SEM1Q6ZVN7 128 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 ALX4Q9H161 411 aaPredicted RBP7.28□□□□□ -1.24
CTC1-201ENST00000315684 VPREB3Q9UKI3 123 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 C7orf71A4D174 169 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 FAM223BA6NKX1 122 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 RPS20P60866 119 aaKnown RBP7.28□□□□□ -1.24
CTC1-201ENST00000315684 DAD1P61803 113 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 FAM223AQ8IWN6 122 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 SOX21Q9Y651 276 aaPredicted RBP7.28□□□□□ -1.24
CTC1-201ENST00000315684 NOTCH3Q9UM47 2321 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 H3BVH4 76 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 ALX3O95076 343 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 ERCC8Q13216 396 aa7.28□□□□□ -1.24
CTC1-201ENST00000315684 TCEAL7Q9BRU2 100 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms