RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 THBDP07204 575 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 CD69Q07108 199 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 CD300EQ496F6 205 aaPredicted RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 DPH3Q96FX2 82 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 CLEC7AQ9BXN2 247 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 CYTL1Q9NRR1 136 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 COL4A4P53420 1690 aaPredicted RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 RP1P56715 2156 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 GGTLC3B5MD39 225 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 IGFBP3P17936 291 aaPredicted RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 Q0VFX4 171 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 PRR31Q5SQ13 230 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 DLX4Q92988 240 aaPredicted RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 LSM4Q9Y4Z0 139 aaKnown RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 A0A0G2JNJ9 132 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 C3orf79P0CE67 100 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 IFI27P40305 119 aaPredicted RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 ATP5L2Q7Z4Y8 100 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 ZNF48Q96MX3 618 aaPredicted RBP6.8□□□□□ -1.32
VPS41-202ENST00000310301 CST9LQ9H4G1 147 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 Q9UFV3 132 aa6.8□□□□□ -1.32
VPS41-202ENST00000310301 SLC25A20O43772 301 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 PYYP10082 97 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 MST1P26927 711 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 OSR1Q8TAX0 266 aaPredicted RBP6.79□□□□□ -1.32
VPS41-202ENST00000310301 MGST2Q99735 147 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 TM4SF5O14894 197 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 CHD5Q8TDI0 1954 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 A0A1B0GW64 132 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 A8MWP6 167 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 CACNG8Q8WXS5 425 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 CDKN1AP38936 164 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 NPC2P61916 151 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 ORMDL2Q53FV1 153 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 ACP7Q6ZNF0 438 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 TMEM144Q7Z5S9 345 aa6.79□□□□□ -1.32
VPS41-202ENST00000310301 IGKV1D-43A0A0B4J1Z2 117 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 IGKV1D-13A0A0B4J2D9 117 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 IGKV1-13P0DP09 117 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 LY6EQ16553 131 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 PRR30Q53SZ7 412 aaPredicted RBP6.78□□□□□ -1.32
VPS41-202ENST00000310301 C2orf82Q6UX34 121 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 C7orf69Q9H7B7 122 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 IGHV3OR16-8A0A075B7F1 116 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 CD5LO43866 347 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 CRYGSP22914 178 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 PPIFP30405 207 aaKnown RBP6.78□□□□□ -1.32
VPS41-202ENST00000310301 FBXL15Q9H469 300 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 GREB1Q4ZG55 1949 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 EFNB3Q15768 340 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 PSG3Q16557 428 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 CFAP161Q6P656 301 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 OR13A1Q8NGR1 328 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 CKAP5Q14008 2032 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 B4DSR2 109 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 PPBPP02775 128 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.78□□□□□ -1.32
VPS41-202ENST00000310301 PHLDA1Q8WV24 401 aaPredicted RBP6.78□□□□□ -1.32
VPS41-202ENST00000310301 DUX3Q96PT4 197 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 INTS1Q8N201 2190 aaKnown RBP6.78□□□□□ -1.32
VPS41-202ENST00000310301 CECR9P0C854 216 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 SRD5A1P18405 259 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 CD33P20138 364 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 FBXL7Q9UJT9 491 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 ANK1P16157 1881 aa6.78□□□□□ -1.32
VPS41-202ENST00000310301 LGALS1P09382 135 aaKnown RBP6.77□□□□□ -1.33
VPS41-202ENST00000310301 NPSP0C0P6 89 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 PAX1P15863 534 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 LHFPL4Q7Z7J7 247 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 PSG8Q9UQ74 426 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 IGHV1-2P23083 117 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 FXYD7P58549 80 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 ASCL2Q99929 193 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 SLX1AQ9BQ83 275 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 POLR3KQ9Y2Y1 108 aaPredicted RBP6.77□□□□□ -1.33
VPS41-202ENST00000310301 TGFBR3LH3BV60 316 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 RAMP3O60896 148 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 GHRHP01286 108 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 ID3Q02535 119 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 RTN4RL2Q86UN3 420 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
VPS41-202ENST00000310301 PF4P02776 101 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 TRGV3P03979 118 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 LAGE3Q14657 143 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 LINC01551Q86U37 167 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 NCOR1P1Q9H4R4 102 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 TRBV6-7A0A0A0MS04 114 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 CD28P10747 220 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 TNFRSF14Q92956 283 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 DCTN5Q9BTE1 182 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 SNHG12Q9BXW3 62 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 C21orf62Q9NYP8 219 aa6.77□□□□□ -1.33
VPS41-202ENST00000310301 SYS1-DBNDD2H3BUS1 97 aa6.76□□□□□ -1.33
VPS41-202ENST00000310301 MRPL20Q9BYC9 149 aaKnown RBP6.76□□□□□ -1.33
VPS41-202ENST00000310301 IGHV2OR16-5A0A0B4J2B6 119 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms