RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CD177Q8N6Q3 437 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 CACNG8Q8WXS5 425 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 CHCHD1Q96BP2 118 aaKnown RBP8.35□□□□□ -1.07
UPF3B-201ENST00000276201 SLC25A33Q9BSK2 321 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 TNFRSF19Q9NS68 423 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 IDI2-AS1Q9NZ38 188 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 DSCAML1Q8TD84 2053 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 PLCE1Q9P212 2302 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 HSBP1O75506 76 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 CELA3BP08861 270 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 IGLL1P15814 213 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 PRDX2P32119 198 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 MPV17P39210 176 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 TNXAQ16473 311 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 CT83Q5H943 113 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 MBNL2Q5VZF2 373 aaKnown RBP8.35□□□□□ -1.07
UPF3B-201ENST00000276201 OR4A47Q6IF82 309 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
UPF3B-201ENST00000276201 EBLN2Q6P2I7 272 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 UNQ5815/PRO19632Q6UWF5 114 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 PET117Q6UWS5 81 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 NHLRC2Q8NBF2 726 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 TMEM190Q8WZ59 177 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 PLEKHA3Q9HB20 300 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 GNG12Q9UBI6 72 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 METRNQ9UJH8 293 aa8.35□□□□□ -1.07
UPF3B-201ENST00000276201 IGKV3-15P01624 115 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 IGLV1-44P01699 117 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 HINT1P49773 126 aaPredicted RBP8.34□□□□□ -1.07
UPF3B-201ENST00000276201 FXYD3Q14802 87 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF826PQ6ZT77 177 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 FAM169BQ8N8A8 192 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 ZNF596Q8TC21 504 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 IGFBPL1Q8WX77 278 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 FAM167A-AS1Q96KT0 104 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 TMEM70Q9BUB7 260 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 WNT10AQ9GZT5 417 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 C7orf69Q9H7B7 122 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 PPIAL4AQ9Y536 164 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 AKAP9Q99996 3911 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 TANC2Q9HCD6 1990 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 SRRM5B3KS81 715 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 M0R2Z0 102 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 UPK2O00526 184 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 OR5AL1P0C617 328 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 CECR9P0C854 216 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 C3orf36Q3SXR2 165 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 FAM19A2Q8N3H0 131 aa8.34□□□□□ -1.07
UPF3B-201ENST00000276201 DSCAMO60469 2012 aa8.34□□□□□ -1.08
UPF3B-201ENST00000276201 DEFB113Q30KQ7 82 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 FAM120AOSQ5T036 256 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 RFESDQ8TAC1 157 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 CCL19Q99731 98 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 MS4A6AQ9H2W1 248 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 LINC00574Q9H8X3 128 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 OR51B2Q9Y5P1 312 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 E7EQL1 145 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 HIST1H1EP10412 219 aaKnown RBP8.33□□□□□ -1.08
UPF3B-201ENST00000276201 NTF3P20783 257 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 RPL39P5Q59GN2 51 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 GDF5OSQ5U4N7 250 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 OR4C5Q8NGB2 326 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 FOXC2Q99958 501 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 HEATR1Q9H583 2144 aaKnown RBP8.33□□□□□ -1.08
UPF3B-201ENST00000276201 ZNF492Q9P255 531 aa8.33□□□□□ -1.08
UPF3B-201ENST00000276201 OR7C2O60412 319 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 MYCNOSP40205 109 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 ZNF134P52741 427 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 TCL1AP56279 114 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 CD69Q07108 199 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 C12orf54Q6X4T0 127 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 DEFB125Q8N687 156 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 NUDT10Q8NFP7 164 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 OR1L4Q8NGR5 311 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 NUDT11Q96G61 164 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 SLC25A2Q9BXI2 301 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 BEX4Q9NWD9 120 aaPredicted RBP8.32□□□□□ -1.08
UPF3B-201ENST00000276201 CALYQ9NYX4 217 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 KLF12Q9Y4X4 402 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 PRRC2AP48634 2157 aaKnown RBP8.32□□□□□ -1.08
UPF3B-201ENST00000276201 IGKV1D-17A0A075B6S4 117 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 IGKV1OR2-108A0A075B7D4 117 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 FAM231BA6NCW3 169 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 PEX7O00628 323 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 ACTL6BO94805 426 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 MGST1P10620 155 aaKnown RBP8.32□□□□□ -1.08
UPF3B-201ENST00000276201 MFAP2P55001 183 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 LCN12Q6JVE5 192 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 ZNF329Q86UD4 541 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 VKORC1L1Q8N0U8 176 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 LRRC29Q8WV35 223 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 PMCHL2Q9BQD1 86 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 GFRA4Q9GZZ7 299 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 SERTAD4Q9NUC0 356 aa8.32□□□□□ -1.08
UPF3B-201ENST00000276201 TAX1BP3O14907 124 aa8.31□□□□□ -1.08
UPF3B-201ENST00000276201 SPINK4O60575 86 aa8.31□□□□□ -1.08
UPF3B-201ENST00000276201 RNASE2P10153 161 aaKnown RBP8.31□□□□□ -1.08
UPF3B-201ENST00000276201 SMIM15Q7Z3B0 74 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms