RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 LY6HO94772 140 aa15.58■□□□□ 0.08
SMPD3-201ENST00000219334 RNF222A6NCQ9 220 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 F2Z2F3 143 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 RPL15P61313 204 aaKnown RBP15.57■□□□□ 0.08
SMPD3-201ENST00000219334 FAM169BQ8N8A8 192 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 A0A0G2JMZ2 1700 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 LRRC37A2A6NM11 1700 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 RALGAPA2Q2PPJ7 1873 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 IGKV1D-8A0A087WSZ0 117 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 ZNF815PA8K554 130 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 CD28P10747 220 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 GAS1P54826 345 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 PSG1P11464 419 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 ZNF236Q9UL36 1845 aa15.57■□□□□ 0.08
SMPD3-201ENST00000219334 DOCK4Q8N1I0 1966 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 CLPSP04118 112 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 MSMBP08118 114 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 B3GALT5-AS1P59052 145 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 PRR30Q53SZ7 412 aaPredicted RBP15.56■□□□□ 0.08
SMPD3-201ENST00000219334 DTX1Q86Y01 620 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 E7EQL1 145 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 ORMDL2Q53FV1 153 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 NXT2Q9NPJ8 142 aaKnown RBP15.56■□□□□ 0.08
SMPD3-201ENST00000219334 C9orf139Q6ZV77 190 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 NR2C2APQ86WQ0 139 aa15.56■□□□□ 0.08
SMPD3-201ENST00000219334 PMS2P5A8MQ11 134 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 GFI1BQ5VTD9 330 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 SIPA1L1O43166 1804 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 RPL23P62829 140 aaKnown RBP15.55■□□□□ 0.08
SMPD3-201ENST00000219334 TMEM190Q8WZ59 177 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 OSTCQ9NRP0 149 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 IGKV1-27A0A075B6S5 117 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 NPIPB5A8MRT5 1133 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 ACTL10Q5JWF8 245 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 SCN5AQ14524 2016 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 J3QRE1 110 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 SAA4P35542 130 aa15.55■□□□□ 0.08
SMPD3-201ENST00000219334 TRGV1A0A0A0MS02 117 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 H0YJW9 148 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 PRTN3P24158 256 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 RNF126Q9BV68 326 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 CHD5Q8TDI0 1954 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 FAM223BA6NKX1 122 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 KLF17Q5JT82 389 aaPredicted RBP15.54■□□□□ 0.08
SMPD3-201ENST00000219334 FAM223AQ8IWN6 122 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 LINC00469Q8N7U9 141 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 PSCAO43653 123 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 APOMO95445 188 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 RPL36AP83881 106 aaKnown RBP15.54■□□□□ 0.08
SMPD3-201ENST00000219334 TREML4Q6UXN2 200 aa15.54■□□□□ 0.08
SMPD3-201ENST00000219334 RPL36ALQ969Q0 106 aaKnown RBP15.54■□□□□ 0.08
SMPD3-201ENST00000219334 MPZP25189 248 aa15.53■□□□□ 0.08
SMPD3-201ENST00000219334 ASCL4Q6XD76 172 aa15.53■□□□□ 0.08
SMPD3-201ENST00000219334 RNF182Q8N6D2 247 aa15.53■□□□□ 0.08
SMPD3-201ENST00000219334 SLC25A39Q9BZJ4 359 aaPredicted RBP15.53■□□□□ 0.08
SMPD3-201ENST00000219334 CARHSP1Q9Y2V2 147 aaKnown RBP15.53■□□□□ 0.08
SMPD3-201ENST00000219334 TRAV5A0A0B4J249 113 aa15.53■□□□□ 0.08
SMPD3-201ENST00000219334 A6NNC1 897 aa15.53■□□□□ 0.08
SMPD3-201ENST00000219334 LYPD2Q6UXB3 125 aa15.53■□□□□ 0.08
SMPD3-201ENST00000219334 DDTP30046 118 aa15.52■□□□□ 0.08
SMPD3-201ENST00000219334 IGKV2-40A0A087WW87 121 aaPredicted RBP15.52■□□□□ 0.08
SMPD3-201ENST00000219334 SRRM4A7MD48 611 aaKnown RBP15.52■□□□□ 0.08
SMPD3-201ENST00000219334 IGKV2D-40P01614 121 aaPredicted RBP15.52■□□□□ 0.08
SMPD3-201ENST00000219334 C1QTNF9P0C862 333 aa15.52■□□□□ 0.08
SMPD3-201ENST00000219334 TMEM86BQ8N661 226 aa15.52■□□□□ 0.08
SMPD3-201ENST00000219334 TRGV9Q99603 122 aa15.52■□□□□ 0.08
SMPD3-201ENST00000219334 CADP27708 2225 aa15.52■□□□□ 0.08
SMPD3-201ENST00000219334 KIF26BQ2KJY2 2108 aa15.52■□□□□ 0.08
SMPD3-201ENST00000219334 A0A087WWC5 75 aa15.52■□□□□ 0.07
SMPD3-201ENST00000219334 NDPQ00604 133 aa15.52■□□□□ 0.07
SMPD3-201ENST00000219334 SSBP4Q9BWG4 385 aaPredicted RBP15.52■□□□□ 0.07
SMPD3-201ENST00000219334 LTBP1Q14766 1721 aa15.52■□□□□ 0.07
SMPD3-201ENST00000219334 SNAI2O43623 268 aa15.52■□□□□ 0.07
SMPD3-201ENST00000219334 SIGLEC9Q9Y336 463 aa15.52■□□□□ 0.07
SMPD3-201ENST00000219334 FAM19A2Q8N3H0 131 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 Q96MF0 132 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 SCRT1Q9BWW7 348 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 PEF1Q9UBV8 284 aaKnown RBP15.51■□□□□ 0.07
SMPD3-201ENST00000219334 FCN3O75636 299 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 HBDP02042 147 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 F8VVB4 439 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 F8VWA3 439 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 TTC32Q5I0X7 151 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 COQ2Q96H96 371 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 IGKV1D-17A0A075B6S4 117 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 NAPSAO96009 420 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 LCTP09848 1927 aa15.51■□□□□ 0.07
SMPD3-201ENST00000219334 LINC01549A6NIU2 74 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 INSP01308 110 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 ZNF138P52744 262 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 PNRC2Q9NPJ4 139 aaKnown RBP15.5■□□□□ 0.07
SMPD3-201ENST00000219334 TSPAN13O95857 204 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 LHFPL4Q7Z7J7 247 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 GGTLC1Q9BX51 225 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 GREB1Q4ZG55 1949 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 CKS1BP61024 79 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 LINC00477Q96M19 166 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 RHPN1-AS1Q9BWJ2 59 aa15.5■□□□□ 0.07
SMPD3-201ENST00000219334 RIPPLY3P57055 190 aa15.49■□□□□ 0.07
SMPD3-201ENST00000219334 IGFL3Q6UXB1 125 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms