RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Vmn1r179Q8R2B4 323 aa8.28□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr523Q8VFE7 317 aa8.28□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr1446Q8VFX4 308 aa8.28□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Olfr167Q8VGJ5 312 aa8.28□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Vax2Q9WTP9 292 aa8.28□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Syngr4Q9Z1L2 233 aa8.28□□□□□ -1.08
Ccdc40-202ENSMUST00000053440 Cdc34bA0A140T8I4 237 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr1326-ps1A0A140T8J7 311 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Mgst2A2RST1 147 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Hist1h2bfP10853 126 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Ccr8P56484 353 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 St8sia5P70126 412 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Q504N7 393 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 ParlQ5XJY4 377 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Vdac1Q60932 296 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Hist1h2bbQ64475 126 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Tbpl2Q6SJ95 350 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr93Q6UAH1 312 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Prss35Q8C0F9 409 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Hist1h2bkQ8CGP1 126 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Hist1h2bpQ8CGP2 126 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 S1pr5Q91X56 400 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Rab27bQ99P58 218 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Rnaseh2cQ9CQ18 166 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Fam241aQ9CZL2 131 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Cox20Q9D7J4 117 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Vamp5Q9Z2P8 102 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 NacaP70670 2187 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Gm21778A0A087WNP8 232 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Igkv13-84A0A140T8N3 115 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 9130019O22RikG3X941 543 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Atpif1O35143 106 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Lin7cO88952 197 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 KrasP32883 189 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Lrrc30Q3UV48 300 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Fam173aQ501J2 229 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Taar3Q5QD16 343 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Lrtm2Q8BGX3 370 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Srsf7Q8BL97 267 aaKnown RBP8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Tmem41bQ8K1A5 291 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr1170Q8VFG1 316 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Tmprss11dQ8VHK8 417 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Glrx2Q923X4 156 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Fbxo24Q9D417 589 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Tsc22d4Q9EQN3 387 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Mlf1Q9QWV4 267 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Kcnip3Q9QXT8 256 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Pcnx2Q5DU28 2122 aa8.27□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Gm28372A0A087WNV0 220 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Idh3gP70404 393 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Slc25a29Q8BL03 306 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 RetnlgQ8K426 117 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Prss45Q8K4I7 317 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Mrps18cQ8R2L5 143 aaKnown RBP8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr473Q8VG44 310 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Tmem170aQ9D342 144 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 LenepQ9WVB6 61 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Fndc10A2A9Q0 223 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Vipr2P41588 437 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 OsmP53347 263 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Wnt10aP70701 417 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 HaaoQ78JT3 286 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 CdiptQ8VDP6 213 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Uqcc1Q9CWU6 295 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Flg2Q2VIS4 2362 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Gm10778A0A087WNP5 499 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Adcyap1O70176 175 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 RelP15307 587 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Rpl30P62889 115 aaKnown RBP8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Mpc1P63030 109 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Fam160a2Q3U2I3 975 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr43Q7TRX1 313 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr403Q7TRX2 313 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Rnps1Q99M28 305 aaKnown RBP8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Ms4a6bQ99N09 244 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Tmbim7Q9D592 302 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Aifm1Q9Z0X1 612 aa8.26□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Zfp972A2AW65 139 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr1053L7MU59 313 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Foxf2O54743 446 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 PtcraP0C6B2 199 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Psmb6Q60692 238 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Il22ra2Q80XF5 230 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Neil3Q8K203 606 aaKnown RBP8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Rpp21Q8R040 150 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Gm10306Q9CUK2 115 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Fstl3Q9EQC7 256 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Rnd2Q9QYM5 227 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Trav18A0A075B656 109 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Igkv14-111A0A140T8P9 117 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 1700025C18RikA2A580 89 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 H2-M5A7VMS3 348 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Prss2P07146 246 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Ube2g2P60605 165 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Reg2Q08731 173 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Clec4a1Q80UI7 245 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Kazald1Q8BJ66 313 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Olfr482Q8VG03 323 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Sh3bgrl3Q91VW3 93 aa8.25□□□□□ -1.09
Ccdc40-202ENSMUST00000053440 Sval2Q99N75 144 aa8.25□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms