RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Herpud1Q9JJK5 391 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Egr4Q9WUF2 478 aa10.11□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm21778A0A087WNP8 232 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr709-ps1A0A140T8J9 307 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Slc35d1A2AKQ0 355 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1098A2AVB0 315 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mesp2O08574 370 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 P01759 136 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Hmga2P52927 108 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Wnt10aP70701 417 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm16503Q8C6M9 103 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr159Q9QZ19 319 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm42420A0A0J9YUQ2 99 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm4881A0A140LIR9 352 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Pom121l12A0A1B0GSJ4 278 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp942B8JJA7 486 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 SepsecsQ6P6M7 504 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rnf182Q8C432 247 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ndfip1Q8R0W6 221 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Slc25a28Q8R0Z5 364 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ndufb3Q9CQZ6 104 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Xrcc3Q9CXE6 349 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ms4a4cQ9D3F6 226 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Q9D7E4 109 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Fam210bQ9D8B6 190 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rhebl1Q9D8T3 184 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Vmn1r63Q9EPT1 300 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ralgapa1Q6GYP7 2035 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1245A0A1L1SQJ6 307 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Pitx3O35160 302 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Zfp58P16372 489 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Cd3eP22646 189 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ctf1Q60753 203 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1371Q7TQT7 311 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mrps36Q9CQX8 102 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mrps30Q9D0G0 442 aaKnown RBP10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 CrygsO35486 178 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Foxr2Q3UM89 302 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Fbxw26Q8BI58 466 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Slc36a4Q8CH36 500 aa10.1□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1124A2AT86 318 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Sertad4A7DTG3 377 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Igsf23B2RTN2 239 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm16519F8VQK7 162 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Grcc10O35127 126 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 DhodhO35435 395 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Sc5dO88822 299 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gpm6bP35803 328 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Trav6d-4Q5R1I0 115 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Wdyhv1Q80WB5 209 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 1810024B03RikQ8BWE1 200 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1294Q8VGE5 312 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Defb3Q9WTL0 63 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Igkv1-131A0A140T8M8 120 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Trav12-1A0N8R1 115 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1024A2ASU7 327 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm11756A2BEJ1 356 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 4930444P10RikD3YUR1 185 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Gm9602J3QPD5 205 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Pde6dO55057 150 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Igsf11P0C673 428 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Foxg1Q60987 481 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr43Q7TRX1 313 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr403Q7TRX2 313 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ercc8Q8CFD5 397 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr654Q8VF27 341 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Nup210Q9QY81 1886 aaKnown RBP10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Nlrc5C3VPR6 1915 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 D930048N14RikA2AA67 225 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Vmn1r114L7N226 321 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Vmn1r126L7N2C8 321 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Exosc2Q8VBV3 293 aaKnown RBP10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 9330161L09RikQ9D253 136 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Sh2d6Q9D413 297 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Tmub1Q9JMG3 245 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 C2cd4aE9Q861 334 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Sub1P11031 127 aaKnown RBP10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Id4P41139 161 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Arf6P62331 175 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Mettl4Q3U034 471 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1362Q5SZZ8 308 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Dph7Q9CYU6 477 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Znf319Q9ERR8 581 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Ighv14-2A0A075B5R7 117 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Trav15-2-dv6-2A0A075B650 123 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr905L7N1X5 310 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Cdk2P97377 346 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 H2-T22Q31615 379 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Znf260Q62513 407 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Dirc2Q8BFQ6 478 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1431Q8VF59 312 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1243Q8VGM7 305 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Rnf2Q9CQJ4 336 aa10.09□□□□□ -0.79
Pcif1-201ENSMUST00000041643 Olfr1458A0A1L1SSD5 307 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Gm4791J3QQ14 102 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tnfrsf17O88472 185 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 IfngP01580 155 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Arl6ip6Q8BH07 226 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Nicn1Q9CQM0 213 aa10.08□□□□□ -0.8
Pcif1-201ENSMUST00000041643 Tmem219Q9D123 240 aa10.08□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 37.9 ms