RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Olfr124Q8VGW6 315 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fgfrl1Q91V87 529 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rnf151Q9CQ29 239 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cyc1Q9D0M3 325 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zfpl1Q9DB43 310 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fgf7P36363 194 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 St6galnac2P70277 373 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Prss38Q3UKY7 322 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Foxf1Q61080 378 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Spcs3Q6ZWQ7 180 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 YbeyQ8CAV0 164 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cdc34Q8CFI2 235 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Sh3bgrl3Q91VW3 93 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 P01746 140 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Lgals3P16110 264 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ccr8P56484 353 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 GalnsQ571E4 520 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Reep5Q60870 185 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm5111Q8C9M4 190 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr736Q8VFT6 312 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Nup210Q9QY81 1886 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Igkv1-132A0A0B4J1H9 120 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Lin7cO88952 197 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ly6aP05533 134 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pet117P0DJF2 80 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 MpgQ04841 333 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Oxgr1Q6IYF8 337 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Vmn1r89Q8R256 316 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Bcdin3dQ91YP1 285 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Mrps30Q9D0G0 442 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ndufb10Q9DCS9 176 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Med13lQ6JPI3 2207 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1248A0A1L1SSZ5 307 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Esp6A8R0U0 136 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pcgf2P23798 342 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rac3P60764 192 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cdv3Q4VAA2 281 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 BmfQ91ZE9 185 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Eny2Q9JIX0 101 aaKnown RBP9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Il17bQ9QXT6 180 aa9.69□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Prune2Q52KR3 3084 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rps2-ps6A0A140T8L5 221 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cldn34c4A2ANA3 212 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Igh-3P01867 404 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Smad4P97471 551 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 HrasQ61411 189 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pth2Q91W27 100 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Atp6v1fQ9D1K2 119 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Eaf1Q9D4C5 268 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Wdr5bQ9D7H2 328 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Chst4Q9R1I1 388 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Vmn1r34G3XA52 309 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pmp2P24526 132 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rpl23P62830 140 aaKnown RBP9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Nxph1Q61200 271 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Prss35Q8C0F9 409 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Ythdf2Q91YT7 579 aaKnown RBP9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tm7sf3Q9CRG1 565 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tmem183Q9JJB9 375 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cbln1Q9R171 193 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Frem1Q684R7 2191 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm14548E9Q1Z6 680 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Pira2F8VQ94 680 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rab24P35290 203 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cdk2P97377 346 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Hhipl1Q14DK5 791 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr1448Q8VFX1 314 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Alkbh4Q9D8F1 300 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr175-ps1A0A140T8K4 308 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Slc35d1A2AKQ0 355 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gm21244J3QK38 227 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 SdcbpO08992 299 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gabra2P26048 451 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zfp72Q0VFY0 435 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zdhhc23Q5Y5T3 425 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Dcaf12Q8BGZ3 453 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Q8CDS7 251 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Klre1Q8CJC7 226 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr368Q8VF22 327 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Fkbp11Q9D1M7 201 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Rarres2Q9DD06 162 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tbx21Q9JKD8 530 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Hsd17b6Q9R092 317 aa9.68□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Kdf1A2A9F4 397 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 PpiaP17742 164 aaKnown RBP9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Zfp874bQ7M6X2 447 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Olfr959Q9EQ86 311 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Trip12G5E870 2025 aaKnown RBP9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 CrygsO35486 178 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Cst7O89098 144 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Hspb7P35385 169 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Gnb2P62880 340 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Serf2P84102 59 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Psg27Q497W2 474 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Prss3Q792Z0 246 aaKnown RBP9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Tlcd2Q8VC26 310 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 RabepkQ8VCH5 380 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 1700069L16RikQ9D9H5 109 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Btbd17Q9DB72 478 aa9.67□□□□□ -0.86
Topbp1-201ENSMUST00000035164 Herpud1Q9JJK5 391 aa9.67□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 47.3 ms