RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 RNF2Q99496 336 aa13.34□□□□□ -0.27
SPIN3-220ENST00000639257 TBC1D24Q9ULP9 559 aa13.34□□□□□ -0.27
SPIN3-220ENST00000639257 RBMY1BA6NDE4 496 aaKnown RBP13.33□□□□□ -0.28
SPIN3-220ENST00000639257 RBMY1EA6NEQ0 496 aaKnown RBP13.33□□□□□ -0.28
SPIN3-220ENST00000639257 MPTX1A8MV57 137 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 PRSS46E5RG02 174 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 YIF1AO95070 293 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 TCRBP04435 133 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 RBMY1DP0C7P1 496 aaKnown RBP13.33□□□□□ -0.28
SPIN3-220ENST00000639257 CRYBB3P26998 211 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 TIGITQ495A1 244 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 OR52B4Q8NGK2 314 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 OR4D5Q8NGN0 318 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 BATF3Q9NR55 127 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 U3KQE9 123 aa13.33□□□□□ -0.28
SPIN3-220ENST00000639257 SYNGR2O43760 224 aa13.32□□□□□ -0.28
SPIN3-220ENST00000639257 SCGB2A1O75556 95 aa13.32□□□□□ -0.28
SPIN3-220ENST00000639257 MED6O75586 246 aa13.32□□□□□ -0.28
SPIN3-220ENST00000639257 APOHP02749 345 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-220ENST00000639257 CD5P06127 495 aa13.32□□□□□ -0.28
SPIN3-220ENST00000639257 GPX4P36969 197 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-220ENST00000639257 ASAH1Q13510 395 aa13.32□□□□□ -0.28
SPIN3-220ENST00000639257 CIB3Q96Q77 187 aaPredicted RBP13.32□□□□□ -0.28
SPIN3-220ENST00000639257 OR10J1P30954 320 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 ODF3L2Q3SX64 289 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 C4orf46Q504U0 113 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 LILRB2Q8N423 598 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 NPIPB3Q92617 1050 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 RCHY1Q96PM5 261 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 CITED4Q96RK1 184 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 TUBA4BQ9H853 241 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 SRD5A3Q9H8P0 318 aa13.31□□□□□ -0.28
SPIN3-220ENST00000639257 GAMTQ14353 236 aa13.3□□□□□ -0.28
SPIN3-220ENST00000639257 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
SPIN3-220ENST00000639257 IGKV1D-37A0A075B6S9 117 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 IGHV3-49A0A0A0MS15 119 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 TRAV2A0A0B4J234 112 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 OR4C46A6NHA9 309 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 UPK1BO75841 260 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 TOMM40O96008 361 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 IFNA4P05014 189 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 IAPPP10997 89 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 BMI1P35226 326 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 IFITM3Q01628 133 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 SPATA25Q9BR10 227 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 MAGT1Q9H0U3 335 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 ZMAT4Q9H898 229 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 NUDT15Q9NV35 164 aa13.29□□□□□ -0.28
SPIN3-220ENST00000639257 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 IFNA21P01568 189 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 NPPCP23582 126 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 RAB11AP62491 216 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 ZNF846Q147U1 533 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 ACY3Q96HD9 319 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 METTL26Q96S19 204 aa13.28□□□□□ -0.28
SPIN3-220ENST00000639257 TRAV6A0A075B6T7 132 aa13.27□□□□□ -0.29
SPIN3-220ENST00000639257 NKX2-1P43699 371 aaPredicted RBP13.27□□□□□ -0.29
SPIN3-220ENST00000639257 PAX9P55771 341 aa13.27□□□□□ -0.29
SPIN3-220ENST00000639257 USF2Q15853 346 aaPredicted RBP13.27□□□□□ -0.29
SPIN3-220ENST00000639257 TCF24Q7RTU0 167 aa13.27□□□□□ -0.29
SPIN3-220ENST00000639257 THAP8Q8NA92 274 aa13.27□□□□□ -0.29
SPIN3-220ENST00000639257 ZNF431Q8TF32 576 aaPredicted RBP13.27□□□□□ -0.29
SPIN3-220ENST00000639257 Q8WTZ3 238 aa13.27□□□□□ -0.29
SPIN3-220ENST00000639257 TMEM231Q9H6L2 316 aa13.27□□□□□ -0.29
SPIN3-220ENST00000639257 IGKV1OR2-108A0A075B7D4 117 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 A0A1W2PS18 150 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 PMS2P5A8MQ11 134 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 WRBO00258 174 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 DFFBO76075 338 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 PSG1P11464 419 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 POLR2GP62487 172 aaKnown RBP eCLIP13.26□□□□□ -0.29
SPIN3-220ENST00000639257 RPP30P78346 268 aaKnown RBP13.26□□□□□ -0.29
SPIN3-220ENST00000639257 ZBTB8BQ8NAP8 495 aaPredicted RBP13.26□□□□□ -0.29
SPIN3-220ENST00000639257 SMIM8Q96KF7 97 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 EDA2RQ9HAV5 297 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 NBEAL2Q6ZNJ1 2754 aa13.26□□□□□ -0.29
SPIN3-220ENST00000639257 FAM240BA0A1B0GVZ2 78 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 H2AFB2P0C5Z0 115 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 RD3LP0DJH9 198 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 IAH1Q2TAA2 248 aaPredicted RBP13.25□□□□□ -0.29
SPIN3-220ENST00000639257 MZT2BQ6NZ67 158 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 SLC35E1Q96K37 410 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 TRGV9Q99603 122 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 GGTLC1Q9BX51 225 aa13.25□□□□□ -0.29
SPIN3-220ENST00000639257 RCL1Q9Y2P8 373 aaKnown RBP13.25□□□□□ -0.29
SPIN3-220ENST00000639257 IL4P05112 153 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 IL5P05113 134 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 HNRNPCP07910 306 aaKnown RBP eCLIP13.24□□□□□ -0.29
SPIN3-220ENST00000639257 P2RY1P47900 373 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 CMC4P56277 68 aaPredicted RBP13.24□□□□□ -0.29
SPIN3-220ENST00000639257 TAS2R30P59541 319 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 C16orf54Q6UWD8 224 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 TMEM14EPQ6UXP3 125 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 OR51G1Q8NGK1 321 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 GLMPQ8WWB7 406 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 SEC22CQ9BRL7 303 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 MS4A6AQ9H2W1 248 aa13.24□□□□□ -0.29
SPIN3-220ENST00000639257 UBQLN2Q9UHD9 624 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms