RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 SEPSECSQ9HD40 501 aaKnown RBP11.72□□□□□ -0.53
GABRB3-219ENST00000636466 PCDH15Q96QU1 1955 aa11.72□□□□□ -0.53
GABRB3-219ENST00000636466 IGKV1-6A0A0C4DH72 117 aa11.72□□□□□ -0.53
GABRB3-219ENST00000636466 DPRXA6NFQ7 191 aa11.72□□□□□ -0.53
GABRB3-219ENST00000636466 SIAH2O43255 324 aa11.72□□□□□ -0.53
GABRB3-219ENST00000636466 PSG9Q00887 426 aa11.72□□□□□ -0.53
GABRB3-219ENST00000636466 TMEM183AQ8IXX5 376 aa11.72□□□□□ -0.53
GABRB3-219ENST00000636466 C7orf71A4D174 169 aa11.71□□□□□ -0.53
GABRB3-219ENST00000636466 HLA-DRB1P01911 266 aa11.71□□□□□ -0.53
GABRB3-219ENST00000636466 HERVK_113P61574 105 aa11.71□□□□□ -0.53
GABRB3-219ENST00000636466 TMEM219Q86XT9 240 aa11.71□□□□□ -0.53
GABRB3-219ENST00000636466 IGKV3OR2-268A0A0C4DH90 116 aa11.71□□□□□ -0.53
GABRB3-219ENST00000636466 RSPO1Q2MKA7 263 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-219ENST00000636466 C1orf147Q96MC9 270 aaPredicted RBP11.71□□□□□ -0.53
GABRB3-219ENST00000636466 MAP1LC3AQ9H492 121 aa11.71□□□□□ -0.53
GABRB3-219ENST00000636466 LOC105371267A0A1B0GV96 52 aa11.71□□□□□ -0.54
GABRB3-219ENST00000636466 ZNF324O75467 553 aaPredicted RBP11.71□□□□□ -0.54
GABRB3-219ENST00000636466 PRSS2P07478 247 aa11.71□□□□□ -0.54
GABRB3-219ENST00000636466 PRCDQ00LT1 54 aa11.71□□□□□ -0.54
GABRB3-219ENST00000636466 GGTLC1Q9BX51 225 aa11.71□□□□□ -0.54
GABRB3-219ENST00000636466 CRIM1Q9NZV1 1036 aa11.71□□□□□ -0.54
GABRB3-219ENST00000636466 TBL2Q9Y4P3 447 aaKnown RBP11.71□□□□□ -0.54
GABRB3-219ENST00000636466 GCSHP23434 173 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 RPL13AP40429 203 aaKnown RBP11.7□□□□□ -0.54
GABRB3-219ENST00000636466 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 RNASEH2CQ8TDP1 164 aaKnown RBP11.7□□□□□ -0.54
GABRB3-219ENST00000636466 WFDC12Q8WWY7 111 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 CHD8Q9HCK8 2581 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 SORL1Q92673 2214 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 SPTBN4Q9H254 2564 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 FOLR2P14207 255 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 IGKV1-16P04430 117 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 HEPN1Q6WQI6 88 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 Q6ZS92 163 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 DUX5Q96PT3 197 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 LIME1Q9H400 295 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 FRMPD3Q5JV73 1810 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 A0A1W2PRX2 142 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 THBDP07204 575 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 SRD5A1P18405 259 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 COL5A1-AS1Q5SY13 56 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 GFI1BQ5VTD9 330 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 GPR82Q96P67 336 aa11.7□□□□□ -0.54
GABRB3-219ENST00000636466 TRAV40A0A0B4J280 105 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 OR10AG1Q8NH19 301 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 E9PQ18 207 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 RHOGP84095 191 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 FAM159AQ6UWV7 190 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 RNF125Q96EQ8 232 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 A0A1B0GUT8 65 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 SERF1AO75920 110 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 CD5P06127 495 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 CXCL1P09341 107 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 ZNF56Q15929 161 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 SAPCD1Q5SSQ6 148 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 CYYR1Q96J86 154 aa11.69□□□□□ -0.54
GABRB3-219ENST00000636466 TMEM178BH3BS89 294 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BKO60814 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BJP06899 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BOP23527 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BBP33778 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BDP58876 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BCP62807 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST2H2BEQ16778 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BHQ93079 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BNQ99877 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 HIST1H2BMQ99879 126 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 H3BVH4 76 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 ADIPOQQ15848 244 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 CTAG1AP78358 180 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 BRD3OSQ6XYD6 125 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 CDC42EP3Q9UKI2 254 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 IGHV2-26A0A0B4J1V2 119 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 M0QZK8 103 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 REG4Q9BYZ8 158 aa11.68□□□□□ -0.54
GABRB3-219ENST00000636466 MBD3L4A6NDZ8 208 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 MBD3L3A6NE82 208 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 MBD3L5A6NJ08 208 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 APOHP02749 345 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 IGHV1-8P0DP01 117 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 C21orf62-AS1Q17RA5 79 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 MBD3L2Q8NHZ7 208 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 UQCR10Q9UDW1 63 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 A6NDN8 102 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 PMCHL1Q16048 86 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 ANKRD11Q6UB99 2663 aaPredicted RBP11.67□□□□□ -0.54
GABRB3-219ENST00000636466 TRAV8-6A0A0B4J262 113 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 TCRBV4S1A1TA0A5B7 111 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 IGHG3P01860 377 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 GZMBP10144 247 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 CD33P20138 364 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 SLC25A34Q6PIV7 304 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 FOXL2NBQ6ZUU3 175 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 PLXNA2O75051 1894 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 LOC107984156A0A0G2JMH3 177 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 COL8A2P25067 703 aa11.67□□□□□ -0.54
GABRB3-219ENST00000636466 FAM71F2Q6NXP2 309 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms