RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 BCL2P10415 239 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 EGR2P11161 476 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-208ENST00000634934 PRCDQ00LT1 54 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 TNFRSF9Q07011 255 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 AARDQ4LEZ3 155 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 OR10W1Q8NGF6 305 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 OR52E5Q8NH55 327 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 SGMS2Q8NHU3 365 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 CTDSP1Q9GZU7 261 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 PLEKHA3Q9HB20 300 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 ENY2Q9NPA8 101 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 HSPB7Q9UBY9 170 aa11.36□□□□□ -0.59
LINC00339-208ENST00000634934 TEX22C9J3V5 150 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 G3V318 75 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 NDUFA7O95182 113 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 MBP02144 154 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 IGF1P05019 195 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 CD81P60033 236 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 TMEM267Q0VDI3 215 aaPredicted RBP11.35□□□□□ -0.59
LINC00339-208ENST00000634934 TMEM41BQ5BJD5 291 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 UNQ5815/PRO19632Q6UWF5 114 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 FAM24BQ8N5W8 94 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 RBKSQ9H477 322 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 TRAV41A0A0B4J266 112 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 A0A1W2PN81 502 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 REG1AP05451 166 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 AREGP15514 252 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 HOXA5P20719 270 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 CHRNA7P36544 502 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 DLK1P80370 383 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 ELOBQ15370 118 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 ZFP82Q8N141 532 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 CYB561D1Q8N8Q1 229 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 TMEM158Q8WZ71 300 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 CIB3Q96Q77 187 aaPredicted RBP11.35□□□□□ -0.59
LINC00339-208ENST00000634934 C19orf24Q9BVV8 132 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 WDR61Q9GZS3 305 aaKnown RBP11.35□□□□□ -0.59
LINC00339-208ENST00000634934 C16orf95Q9H693 158 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 PSENENQ9NZ42 101 aa11.35□□□□□ -0.59
LINC00339-208ENST00000634934 PUS1Q9Y606 427 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00339-208ENST00000634934 TENM1Q9UKZ4 2725 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 DNHD1Q96M86 4753 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 IGLC7A0M8Q6 106 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 IAPPP10997 89 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 S100PP25815 95 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 WT1-ASQ06250 92 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 FABP9Q0Z7S8 132 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 VWC2Q2TAL6 325 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 AKIRIN2Q53H80 203 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 ASPHD1Q5U4P2 390 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 FAM90A2PQ658T7 463 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 MRPL41Q8IXM3 137 aaKnown RBP11.34□□□□□ -0.59
LINC00339-208ENST00000634934 TMEM217Q8N7C4 229 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 OR5T1Q8NG75 326 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 LINC01006Q8NI28 216 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 DTD1Q8TEA8 209 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 ISOC2Q96AB3 205 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 OR51M1Q9H341 326 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 HEYLQ9NQ87 328 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-208ENST00000634934 RPRMQ9NS64 109 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 SERTAD4Q9NUC0 356 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
LINC00339-208ENST00000634934 TRBV24-1A0A075B6N3 115 aa11.33□□□□□ -0.6
LINC00339-208ENST00000634934 TMEM250H0YL14 139 aa11.33□□□□□ -0.6
LINC00339-208ENST00000634934 AKR1C3P42330 323 aa11.33□□□□□ -0.6
LINC00339-208ENST00000634934 CDX1P47902 265 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-208ENST00000634934 CRIP2P52943 208 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-208ENST00000634934 ERHP84090 104 aaKnown RBP11.33□□□□□ -0.6
LINC00339-208ENST00000634934 RUNX1Q01196 453 aa11.33□□□□□ -0.6
LINC00339-208ENST00000634934 PDLIM3Q53GG5 364 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-208ENST00000634934 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
LINC00339-208ENST00000634934 TET2Q6N021 2002 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-208ENST00000634934 ELOA3CA0A087WX78 387 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-208ENST00000634934 MDKP21741 143 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-208ENST00000634934 HAGHQ16775 308 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 C19orf35Q6ZS72 473 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 HAPLN4Q86UW8 402 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 RCC1LQ96I51 464 aaKnown RBP11.32□□□□□ -0.6
LINC00339-208ENST00000634934 TMEM68Q96MH6 324 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 C20orf24Q9BUV8 137 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 ZNF355PQ9NSJ1 428 aa11.32□□□□□ -0.6
LINC00339-208ENST00000634934 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 PSMB11A5LHX3 300 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 HAX1O00165 279 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 DEFA4P12838 97 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 SLC35B1P78383 322 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 TTC9CQ8N5M4 171 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 TMEM147Q9BVK8 224 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 SDF2L1Q9HCN8 221 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 ZNF580Q9UK33 172 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 RNF114Q9Y508 228 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 STAB1Q9NY15 2570 aa11.31□□□□□ -0.6
LINC00339-208ENST00000634934 NPIPB5A8MRT5 1133 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 SLC38A11Q08AI6 406 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 ARL16Q0P5N6 197 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 ZNF726P1Q15940 193 aa11.3□□□□□ -0.6
LINC00339-208ENST00000634934 C19orf54Q5BKX5 351 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms