RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 LINC00312Q9Y6C7 94 aa10.55□□□□□ -0.72
SKP2-209ENST00000620197 PEX7O00628 323 aa10.55□□□□□ -0.72
SKP2-209ENST00000620197 TNXAQ16473 311 aa10.55□□□□□ -0.72
SKP2-209ENST00000620197 OR2T6Q8NHC8 308 aa10.55□□□□□ -0.72
SKP2-209ENST00000620197 LOC105371242A0A075B767 164 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 TCRBV4S1A1TA0A5B7 111 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 NKX6-3A6NJ46 265 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
SKP2-209ENST00000620197 ZNF137PP52743 207 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 LCN12Q6JVE5 192 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 ST6GALNAC6Q969X2 333 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
SKP2-209ENST00000620197 ROS1P08922 2347 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 C19orf71A6NCJ1 209 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 PMCHL1Q16048 86 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 ASPHD1Q5U4P2 390 aa10.54□□□□□ -0.72
SKP2-209ENST00000620197 MRPL36Q9P0J6 103 aaKnown RBP10.54□□□□□ -0.72
SKP2-209ENST00000620197 TPRP12270 2363 aaKnown RBP10.54□□□□□ -0.72
SKP2-209ENST00000620197 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
SKP2-209ENST00000620197 CT83Q5H943 113 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 FAM215AQ9Y5M1 114 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 K7EP13 123 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 PYYP10082 97 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 PTTG1IPP53801 180 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 UBE2L3P68036 154 aaKnown RBP10.53□□□□□ -0.72
SKP2-209ENST00000620197 SRSF6Q13247 344 aaKnown RBP10.53□□□□□ -0.72
SKP2-209ENST00000620197 RUSC1-AS1Q66K80 236 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 ATOH7Q8N100 152 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 ZCCHC24Q8N2G6 241 aaKnown RBP10.53□□□□□ -0.72
SKP2-209ENST00000620197 FAM216BQ8N7L0 139 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 MRPL20Q9BYC9 149 aaKnown RBP10.53□□□□□ -0.72
SKP2-209ENST00000620197 ZNF355PQ9NSJ1 428 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 NKX2-8O15522 239 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 HOXB4P17483 251 aaPredicted RBP10.53□□□□□ -0.72
SKP2-209ENST00000620197 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 COX11Q9Y6N1 276 aa10.53□□□□□ -0.72
SKP2-209ENST00000620197 NPIPB6E9PJ23 425 aa10.52□□□□□ -0.72
SKP2-209ENST00000620197 SPRY3O43610 288 aa10.52□□□□□ -0.72
SKP2-209ENST00000620197 GNG10P50151 68 aa10.52□□□□□ -0.72
SKP2-209ENST00000620197 UNQ5815/PRO19632Q6UWF5 114 aa10.52□□□□□ -0.72
SKP2-209ENST00000620197 TXN2Q99757 166 aa10.52□□□□□ -0.72
SKP2-209ENST00000620197 BOD1L1Q8NFC6 3051 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 TRAV9-2A0A087WT02 112 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 TRAV17A0A0B4J275 112 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 LTAP01374 205 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 MEF2CQ06413 473 aaPredicted RBP10.52□□□□□ -0.73
SKP2-209ENST00000620197 C22orf34Q6ZV56 151 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 MUC15Q8N387 334 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 NHLRC2Q8NBF2 726 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
SKP2-209ENST00000620197 UBE2V1Q13404 147 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 LINC00322Q6ZN03 302 aaPredicted RBP10.52□□□□□ -0.73
SKP2-209ENST00000620197 NUP37Q8NFH4 326 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 SSBP3Q9BWW4 388 aaPredicted RBP10.52□□□□□ -0.73
SKP2-209ENST00000620197 ZNF430Q9H8G1 570 aaPredicted RBP10.52□□□□□ -0.73
SKP2-209ENST00000620197 SAP30LQ9HAJ7 183 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 ZNF492Q9P255 531 aa10.52□□□□□ -0.73
SKP2-209ENST00000620197 C22orf46C9J442 243 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 APOHP02749 345 aaPredicted RBP10.51□□□□□ -0.73
SKP2-209ENST00000620197 DLX6P56179 175 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 KIR3DL3Q8N743 410 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 OR1L4Q8NGR5 311 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 CCL13Q99616 98 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 TRAV34A0A0B4J273 112 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 IGLC7A0M8Q6 106 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 MGST1P10620 155 aaKnown RBP10.51□□□□□ -0.73
SKP2-209ENST00000620197 C10orf113Q5VZT2 155 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 KLHDC1Q8N7A1 406 aa10.51□□□□□ -0.73
SKP2-209ENST00000620197 A0A1W2PN81 502 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 M0R1B8 84 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 CORTO00230 105 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 GP9P14770 177 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 IGLL1P15814 213 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 REG1BP48304 166 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 HINT1P49773 126 aaPredicted RBP10.5□□□□□ -0.73
SKP2-209ENST00000620197 PLP1P60201 277 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 PDPNQ86YL7 162 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 GATD1Q8NB37 220 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 GTSF1Q8WW33 167 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 GFRA4Q9GZZ7 299 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 ZNF331Q9NQX6 463 aaPredicted RBP10.5□□□□□ -0.73
SKP2-209ENST00000620197 LEMD1Q68G75 181 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 CHRDL1Q9BU40 450 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 EPDR1Q9UM22 224 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 HIGD1CA8MV81 97 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 PIP4P1Q86T03 277 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 HINT2Q9BX68 163 aa10.5□□□□□ -0.73
SKP2-209ENST00000620197 IGHV2-70DA0A0C4DH43 119 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 CRYGBP07316 175 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 HIST1H1EP10412 219 aaKnown RBP10.49□□□□□ -0.73
SKP2-209ENST00000620197 MFAP2P55001 183 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 TNFAIP6P98066 277 aaPredicted RBP10.49□□□□□ -0.73
SKP2-209ENST00000620197 HARBI1Q96MB7 349 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 GAL3ST2Q9H3Q3 398 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 SOX21Q9Y651 276 aaPredicted RBP10.49□□□□□ -0.73
SKP2-209ENST00000620197 TRBV6-1A0A0K0K1D8 114 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 hADV38S2A0JD32 116 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 ZNF785A8K8V0 405 aa10.49□□□□□ -0.73
SKP2-209ENST00000620197 CCL11P51671 97 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms