RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 TCTEX1D4Q5JR98 221 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 C11orf52Q96A22 123 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 LY96Q9Y6Y9 160 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 SMIM27A0A1W2PRY6 76 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 ANKRD30BLA7E2S9 258 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 TMEM249Q2WGJ8 235 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 OR52E5Q8NH55 327 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 ZNF479Q96JC4 524 aa12.96□□□□□ -0.33
SEMA3B-214ENST00000619119 CADP27708 2225 aa12.96□□□□□ -0.34
SEMA3B-214ENST00000619119 CRXO43186 299 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 SYNGR1O43759 233 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 TBC1D28Q2M2D7 210 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 RPRMLQ8N4K4 120 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 RABAC1Q9UI14 185 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 NBEAQ8NFP9 2946 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 LRRC30A6NM36 301 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 CEACAM4O75871 244 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 ATP5G2Q06055 141 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 KLF5Q13887 457 aaPredicted RBP12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 MS4A6AQ9H2W1 248 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 ZNF257Q9Y2Q1 563 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 A0A1W2PRE2 83 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 MAP1LC3CQ9BXW4 147 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 ZNF355PQ9NSJ1 428 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 PCNX1Q96RV3 2341 aa12.95□□□□□ -0.34
SEMA3B-214ENST00000619119 ACTL6BO94805 426 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 ALKBH6Q3KRA9 238 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 IGF2RP11717 2491 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 REG1BP48304 166 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 Q6ZT83 130 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 FA2HQ7L5A8 372 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 TEX45Q8NA69 505 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 ICE1Q9Y2F5 2266 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 SPTBN4Q9H254 2564 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 SPTA1P02549 2419 aa12.94□□□□□ -0.34
SEMA3B-214ENST00000619119 ZNF808Q8N4W9 903 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 DRAM1Q8N682 238 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 FZR1Q9UM11 496 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 J3QR89 54 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 ZNF138P52744 262 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 TRAT1Q6PIZ9 186 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 DKK4Q9UBT3 224 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 C15orf62A8K5M9 175 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 FCGR2BP31994 310 aaPredicted RBP12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 MGST2Q99735 147 aa12.93□□□□□ -0.34
SEMA3B-214ENST00000619119 GGTLC1Q9BX51 225 aa12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 C1RLQ9NZP8 487 aa12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 HEATR1Q9H583 2144 aaKnown RBP12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 SAMD5Q5TGI4 173 aa12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 CXorf67Q86X51 503 aaPredicted RBP12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 RBMXL3Q8N7X1 1067 aaKnown RBP12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 LRRC29Q8WV35 223 aa12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 H1FXQ92522 213 aaKnown RBP12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 C5orf30Q96GV9 206 aa12.92□□□□□ -0.34
SEMA3B-214ENST00000619119 WFDC2Q14508 124 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 PSG5Q15238 335 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 SH2D6Q7Z4S9 175 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 NUP35Q8NFH5 326 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 SPATA25Q9BR10 227 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 TREML4Q6UXN2 200 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 SEM1Q6ZVN7 128 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 SCNM1Q9BWG6 230 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 MS4A5Q9H3V2 200 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 ZNF71Q9NQZ8 489 aaPredicted RBP12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 OPRK1P41145 380 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 FGF12P61328 243 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 GUSBP1Q15486 140 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 MKXQ8IYA7 352 aa12.91□□□□□ -0.34
SEMA3B-214ENST00000619119 HOXA4Q00056 320 aaPredicted RBP12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 Q6ZR03 302 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 Q6ZS92 163 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 MTURNQ8N3F0 131 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 SPAG8Q99932 426 aaPredicted RBP12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 PGPEP1Q9NXJ5 209 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 TLN1Q9Y490 2541 aaKnown RBP12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 ZGRF1Q86YA3 2104 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 SMG1Q96Q15 3661 aaKnown RBP12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 EFNB3Q15768 340 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 PROCRQ9UNN8 238 aa12.9□□□□□ -0.34
SEMA3B-214ENST00000619119 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 IGLV2-8P01709 118 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 HERV-K104P63124 156 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 ETDBQ3ZM63 59 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 ABHD17AQ96GS6 310 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 SPANXB1Q9NS25 103 aaPredicted RBP12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 KBTBD11-OT1A0A1B0GTJ5 212 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 CSN3P07498 182 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 MPV17P39210 176 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 GNG3P63215 75 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 MIR17HGQ75NE6 70 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 HSPB8Q9UJY1 196 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 F11RQ9Y624 299 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 ADGRG4Q8IZF6 3080 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 GRPP07492 148 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 RPL30P62888 115 aaKnown RBP12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 RTL8BQ17RB0 113 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 IGFL3Q6UXB1 125 aa12.89□□□□□ -0.35
SEMA3B-214ENST00000619119 H2BFWTQ7Z2G1 175 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms