RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 MT-ND4LP03901 98 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 IGKV1-16P04430 117 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 CNTFRP26992 372 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 TAGLN2P37802 199 aaKnown RBP6.95□□□□□ -1.3
SMAD4-217ENST00000611848 AKR1C3P42330 323 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 HOXA1P49639 335 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-217ENST00000611848 FGF8P55075 233 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-217ENST00000611848 RAB11AP62491 216 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 TMEM95Q3KNT9 176 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 RNF212Q495C1 297 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 TMEM177Q53S58 311 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 FFAR4Q5NUL3 377 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 FAM90A2PQ658T7 463 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 SLC35E3Q7Z769 313 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 HIST1H2BAQ96A08 127 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 YPEL4Q96NS1 127 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 C20orf24Q9BUV8 137 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 BET1LQ9NYM9 111 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 MLXQ9UH92 298 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 PRNDQ9UKY0 176 aa6.95□□□□□ -1.3
SMAD4-217ENST00000611848 PUS1Q9Y606 427 aaKnown RBP eCLIP6.95□□□□□ -1.3
SMAD4-217ENST00000611848 TET2Q6N021 2002 aaPredicted RBP6.95□□□□□ -1.3
SMAD4-217ENST00000611848 ZFP92A6NM28 416 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 SRRM4A7MD48 611 aaKnown RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 AP4M1O00189 453 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 CYB5BO43169 146 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 HLA-DRB1P01911 266 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 OPRK1P41145 380 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 ATP5IP56385 69 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 KRTAP10-3P60369 221 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 PLGLAQ15195 96 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 ACOT6Q3I5F7 207 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 AKIRIN2Q53H80 203 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 TREML4Q6UXN2 200 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 OSR1Q8TAX0 266 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 WIPF2Q8TF74 440 aaPredicted RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 TVP23CQ96ET8 276 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 NIPSNAP3BQ9BS92 247 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 FKBP11Q9NYL4 201 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 LSM4Q9Y4Z0 139 aaKnown RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 OR51B2Q9Y5P1 312 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 TRRAPQ9Y4A5 3859 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 B4DEV8 164 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 FNDC10F2Z333 226 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 KBTBD11O94819 623 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 CD81P60033 236 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 PRCDQ00LT1 54 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 PSG5Q15238 335 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 SLC24A4Q8NFF2 622 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 RAB24Q969Q5 203 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 HARBI1Q96MB7 349 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 FBXL15Q9H469 300 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 METTL1Q9UBP6 276 aaKnown RBP6.94□□□□□ -1.3
SMAD4-217ENST00000611848 ZNF580Q9UK33 172 aa6.94□□□□□ -1.3
SMAD4-217ENST00000611848 IGHV7-81A0A0B4J1V7 117 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 TEX50A0A1B0GTY4 177 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 CXorf65A6NEN9 183 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 INS-IGF2F8WCM5 200 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 CA2P00918 260 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 IGLV2-23P01705 113 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 IFNA4P05014 189 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 NPY1RP25929 384 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 SLC35B1P78383 322 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 PNRC1Q12796 327 aaPredicted RBP6.93□□□□□ -1.3
SMAD4-217ENST00000611848 BSXQ3C1V8 233 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 VMA21Q3ZAQ7 101 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 OR5AU1Q8NGC0 362 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 OR5B3Q8NH48 314 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 SGMS2Q8NHU3 365 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 MGST2Q99735 147 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 HSPB9Q9BQS6 159 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 GGTLC1Q9BX51 225 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 SLC25A22Q9H936 323 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 NPVFQ9HCQ7 196 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 ENY2Q9NPA8 101 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 MANBALQ9NQG1 85 aa6.93□□□□□ -1.3
SMAD4-217ENST00000611848 PSMB11A5LHX3 300 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 LINC01548A6NM66 108 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 TMEM250H0YL14 139 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 SLC25A17O43808 307 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 YIF1AO95070 293 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 OR2C1O95371 312 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 IGF1P05019 195 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 CRYGBP07316 175 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 SAA1P0DJI8 122 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-217ENST00000611848 MYOD1P15172 320 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 RAB5AP20339 215 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 CDC34P49427 236 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-217ENST00000611848 PSMB3P49720 205 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 CEBPGP53567 150 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 MEF2BQ02080 365 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-217ENST00000611848 ZNF562Q6V9R5 426 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 PPP1R27Q86WC6 154 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 TEX45Q8NA69 505 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 OR4X2Q8NGF9 303 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 OR4A5Q8NH83 315 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 ISOC2Q96AB3 205 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 NOL4LQ96MY1 436 aaPredicted RBP6.92□□□□□ -1.3
SMAD4-217ENST00000611848 TMPRSS5Q9H3S3 457 aa6.92□□□□□ -1.3
SMAD4-217ENST00000611848 PLEKHA3Q9HB20 300 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms