RNA–Protein interactions for RNA: ENST00000599460.5

SYMPK-213, Transcript of symplekin, humanhuman

TSL 1 (best) BASIC

Gene SYMPK, Length 5,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-213ENST00000599460 COL5A1-AS1Q5SY13 56 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 LYRM7Q5U5X0 104 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 NEU1Q99519 415 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 DKK4Q9UBT3 224 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 RNF224P0DH78 156 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 FMC1Q96HJ9 113 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 VSIRQ9H7M9 311 aa12.06□□□□□ -0.48
SYMPK-213ENST00000599460 PYYP10082 97 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 FAM71F2Q6NXP2 309 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 IGKV1-16P04430 117 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 GSX1Q9H4S2 264 aaPredicted RBP12.05□□□□□ -0.48
SYMPK-213ENST00000599460 SIGLEC9Q9Y336 463 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 C15orf32Q32M92 178 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 ZNF841Q6ZN19 808 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 GPR82Q96P67 336 aa12.05□□□□□ -0.48
SYMPK-213ENST00000599460 TCF21O43680 179 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 Q5PR19 223 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 MAPK1IP1LQ8NDC0 245 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 KIAA2026Q5HYC2 2103 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 A0A0G2JRQ6 117 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 MSMBP08118 114 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 PAX8Q06710 450 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 OTORQ9NRC9 128 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 PTPRSQ13332 1948 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 GNG5P63218 68 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 KLF17Q5JT82 389 aaPredicted RBP12.04□□□□□ -0.48
SYMPK-213ENST00000599460 FAM53AQ6NSI3 398 aaPredicted RBP12.04□□□□□ -0.48
SYMPK-213ENST00000599460 LHFPL4Q7Z7J7 247 aa12.04□□□□□ -0.48
SYMPK-213ENST00000599460 SPTBN1Q01082 2364 aaKnown RBP12.04□□□□□ -0.48
SYMPK-213ENST00000599460 ITGB1BP1O14713 200 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 NUTF2P61970 127 aaKnown RBP12.03□□□□□ -0.48
SYMPK-213ENST00000599460 RUSC1-AS1Q66K80 236 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 PSMB11A5LHX3 300 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 SHISA9B4DS77 424 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 CDX1P47902 265 aaPredicted RBP12.03□□□□□ -0.48
SYMPK-213ENST00000599460 FAM74A4Q5TZK3 123 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 C8orf46Q8TAG6 207 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 SLC17A3O00476 420 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 BTF3P20290 206 aaKnown RBP12.03□□□□□ -0.48
SYMPK-213ENST00000599460 RPL13AP40429 203 aaKnown RBP12.03□□□□□ -0.48
SYMPK-213ENST00000599460 TMEM14EPQ6UXP3 125 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 REC114Q7Z4M0 266 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 BEND2Q8NDZ0 799 aa12.03□□□□□ -0.48
SYMPK-213ENST00000599460 C17orf58Q2M2W7 97 aa12.02□□□□□ -0.48
SYMPK-213ENST00000599460 ZNF585BQ52M93 769 aa12.02□□□□□ -0.48
SYMPK-213ENST00000599460 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.48
SYMPK-213ENST00000599460 GGTLC1Q9BX51 225 aa12.02□□□□□ -0.48
SYMPK-213ENST00000599460 TMEM131Q92545 1883 aa12.02□□□□□ -0.48
SYMPK-213ENST00000599460 LOXP28300 417 aaPredicted RBP12.02□□□□□ -0.49
SYMPK-213ENST00000599460 CYTL1Q9NRR1 136 aa12.02□□□□□ -0.49
SYMPK-213ENST00000599460 CARHSP1Q9Y2V2 147 aaKnown RBP12.02□□□□□ -0.49
SYMPK-213ENST00000599460 LOC102724200A0A096LPH7 203 aaPredicted RBP12.02□□□□□ -0.49
SYMPK-213ENST00000599460 KIAA1644Q3SXP7 199 aa12.02□□□□□ -0.49
SYMPK-213ENST00000599460 Q6ZRM9 215 aa12.02□□□□□ -0.49
SYMPK-213ENST00000599460 TRAV5A0A0B4J249 113 aa12.02□□□□□ -0.49
SYMPK-213ENST00000599460 A8MXK9 166 aa12.02□□□□□ -0.49
SYMPK-213ENST00000599460 ANAPC10Q9UM13 185 aa12.02□□□□□ -0.49
SYMPK-213ENST00000599460 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 Q1RN00 199 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 TUBA4BQ9H853 241 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 PRB1P04280 392 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 UBE2E1P51965 193 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 NSUN5P1Q3KNT7 163 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 KIR3DL3Q8N743 410 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 SLC50A1Q9BRV3 221 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 USF3Q68DE3 2245 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 SRSF3P84103 164 aaKnown RBP12.01□□□□□ -0.49
SYMPK-213ENST00000599460 F11RQ9Y624 299 aaKnown RBP12.01□□□□□ -0.49
SYMPK-213ENST00000599460 MUC22E2RYF6 1773 aaPredicted RBP12.01□□□□□ -0.49
SYMPK-213ENST00000599460 PCNX1Q96RV3 2341 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 PSG1P11464 419 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 SRIP30626 198 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 RNASE4P34096 147 aaKnown RBP12.01□□□□□ -0.49
SYMPK-213ENST00000599460 DLX1P56177 255 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 CCL20P78556 96 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 TBX15Q96SF7 602 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 MGST2Q99735 147 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 CDC42EP3Q9UKI2 254 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 A0A1B0GWJ7 208 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 C9JCJ5 164 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 CFHR2P36980 270 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 HERVK_113P61574 105 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 Q96MF0 132 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 NCOR1P1Q9H4R4 102 aa12.01□□□□□ -0.49
SYMPK-213ENST00000599460 A0A1B0GV90 55 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 FGF16O43320 207 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 ZNF56Q15929 161 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 MAP1LC3AQ9H492 121 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 IGHV2-70DA0A0C4DH43 119 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 K7ERU9 68 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 TAS2R60P59551 318 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 LDLRAD2Q5SZI1 272 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 SDF2L1Q9HCN8 221 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 GSN-AS1Q9NRJ2 163 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 PCP4P48539 62 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 HBBP68871 147 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 ATG101Q9BSB4 218 aa12□□□□□ -0.49
SYMPK-213ENST00000599460 SPTAN1Q13813 2472 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms