RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 IGKV1-39P01597 117 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 PMP2P02689 132 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 IGKV1D-39P04432 117 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 RNASE2P10153 161 aaKnown RBP7.11□□□□□ -1.27
TRIM28-210ENST00000597618 BTF3P20290 206 aaKnown RBP7.11□□□□□ -1.27
TRIM28-210ENST00000597618 TTC32Q5I0X7 151 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 GDF5OSQ5U4N7 250 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 FOXI2Q6ZQN5 318 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 TBC1D26Q86UD7 250 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 OR1S2Q8NGQ3 325 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 OR5H6Q8NGV6 325 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 OR5H2Q8NGV7 314 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 OR6F1Q8NGZ6 308 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 Q8WTZ3 238 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 PDCD10Q9BUL8 212 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 SAV1Q9H4B6 383 aaPredicted RBP7.11□□□□□ -1.27
TRIM28-210ENST00000597618 TXNL4BQ9NX01 149 aaKnown RBP7.11□□□□□ -1.27
TRIM28-210ENST00000597618 UBR4Q5T4S7 5183 aa7.11□□□□□ -1.27
TRIM28-210ENST00000597618 VPS13BQ7Z7G8 4022 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 RPS10-NUDT3A0A1W2PQS6 291 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 NUDT3O95989 172 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 IGLC1P0CG04 106 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 YPEL3P61236 119 aaPredicted RBP7.1□□□□□ -1.27
TRIM28-210ENST00000597618 USF2Q15853 346 aaPredicted RBP7.1□□□□□ -1.27
TRIM28-210ENST00000597618 SPATA31B1PQ5VZV4 182 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 OR4B1Q8NGF8 309 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 SCPEP1Q9HB40 452 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 ENY2Q9NPA8 101 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 ANAPC10Q9UM13 185 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 LINC00588Q9Y4M8 146 aa7.1□□□□□ -1.27
TRIM28-210ENST00000597618 FLG2Q5D862 2391 aaPredicted RBP7.1□□□□□ -1.27
TRIM28-210ENST00000597618 LYRM9A8MSI8 78 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 BUB3O43684 328 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 IL4P05112 153 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 OR10J1P30954 320 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 NUP62P37198 522 aaPredicted RBP7.09□□□□□ -1.27
TRIM28-210ENST00000597618 ID1P41134 155 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 PSG9Q00887 426 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 ZNF79Q15937 498 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 MLANAQ16655 118 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 IZUMO4Q1ZYL8 232 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 Q5VSD8 79 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 C1orf158Q8N1D5 194 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 COQ8AQ8NI60 647 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 LINC00052Q96N35 136 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 TMEM208Q9BTX3 173 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 MAGT1Q9H0U3 335 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 SLC35B3Q9H1N7 401 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 PTTG2Q9NZH5 202 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 BLOC1S6Q9UL45 172 aa7.09□□□□□ -1.27
TRIM28-210ENST00000597618 A0A0B4J293 547 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 F5H768 121 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 ATG12O94817 140 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 SLC25A4P12235 298 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 NAT1P18440 290 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 PSMB9P28065 219 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 SDC2P34741 201 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 HRH1P35367 487 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 HSPA13P48723 471 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 PSMB3P49720 205 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 RORCP51449 518 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 RND2P52198 227 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 AKR1C2P52895 323 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 AQP4P55087 323 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 TAS2R20P59543 309 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 DEFB1P60022 68 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 DHODHQ02127 395 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 CLINT1Q14677 625 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 BSXQ3C1V8 233 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 IDNKQ5T6J7 187 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 SSX7Q7RTT5 188 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 LYPD1Q8N2G4 141 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 FRZBQ92765 325 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 Q9H3A6 140 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 Q9H8V8 135 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 SSR3Q9UNL2 185 aa7.08□□□□□ -1.28
TRIM28-210ENST00000597618 A0A1W2PPQ1 181 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 M0QYG6 137 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 IGKV1-5P01602 117 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 P0C879 139 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 DEFB130BP0DP73 79 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 DEFB130AP0DP74 79 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 ETV6P41212 452 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 HTR2BP41595 481 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 PAX9P55771 341 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 TSPAN5P62079 268 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 MXD1Q05195 221 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 FAM78BQ5VT40 261 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 EBLN2Q6P2I7 272 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 PRSS54Q6PEW0 395 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 OR4C16Q8NGL9 310 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 C18orf15Q96N68 181 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 KRTAP1-5Q9BYS1 174 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 PFDN2Q9UHV9 154 aa7.07□□□□□ -1.28
TRIM28-210ENST00000597618 EBAG9O00559 213 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 TOMM40O96008 361 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 ATP5G1P05496 136 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 RD3LP0DJH9 198 aa7.06□□□□□ -1.28
TRIM28-210ENST00000597618 ATP5G3P48201 142 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms