RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 KLK15Q9H2R5 256 aa11.46□□□□□ -0.57
SHKBP1-211ENST00000595945 TCRBV4S1A1TA0A5B7 111 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 PSMB11A5LHX3 300 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 ELANEP08246 267 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 PF4V1P10720 104 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 NPBWR1P48145 328 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 ATP5G2Q06055 141 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 FOXE3Q13461 319 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 RAB31Q13636 194 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 KIAA0141Q14154 515 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 MIC13Q5XKP0 118 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 C10orf99Q6UWK7 81 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 TMEM182Q6ZP80 229 aaPredicted RBP11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 CYP2G1PQ6ZSU1 146 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF329Q86UD4 541 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF709Q8N972 641 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 MYOZ3Q8TDC0 251 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 CCDC140Q96MF4 163 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 KCNIP2Q9NS61 270 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 PXMP4Q9Y6I8 212 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 S4R3C0 116 aa11.45□□□□□ -0.58
SHKBP1-211ENST00000595945 UMAD1C9J7I0 102 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 YIF1AO95070 293 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 IGKV1-17P01599 117 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 CRYBA1P05813 215 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 RAB9AP51151 201 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 TPPP2P59282 170 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 SLC35B1P78383 322 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 FFAR4Q5NUL3 377 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 RNF141Q8WVD5 230 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 EEF1AKMT3Q96AZ1 226 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 VSIRQ9H7M9 311 aa11.44□□□□□ -0.58
SHKBP1-211ENST00000595945 TRAV30A0A087WSZ9 112 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 TRBV7-1A0A0A6YYK4 115 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 ZFP92A6NM28 416 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 TSPAN15O95858 294 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 NMBP08949 121 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 RAB5CP51148 216 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 SELENOTP62341 195 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF90Q03938 601 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 TIGITQ495A1 244 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 TEX38Q6PEX7 206 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 LCNL1Q6ZST4 164 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 COMMD1Q8N668 190 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 STPG3Q8N7X2 389 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF414Q96IQ9 312 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 SLC39A9Q9NUM3 307 aa11.43□□□□□ -0.58
SHKBP1-211ENST00000595945 A0A0G2JLM5 398 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 GNG7O60262 68 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 MBP02144 154 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 CTSGP08311 255 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 GATA2P23769 480 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 ADMP35318 185 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 ELLP55199 621 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 RAB2AP61019 212 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 YPEL3P61236 119 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 B2MP61769 119 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 Q56UQ5 140 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 TMEM41BQ5BJD5 291 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 CLLU1Q5K131 121 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 AKR1C8PQ5T2L2 129 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 DPPA3Q6W0C5 159 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 BPIFCQ8NFQ6 507 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 LINC01006Q8NI28 216 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 LRRC20Q8TCA0 184 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 SAT2Q96F10 170 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 RPRMQ9NS64 109 aa11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 GAR1Q9NY12 217 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-211ENST00000595945 TOMM40O96008 361 aa11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 ACOT6Q3I5F7 207 aaPredicted RBP11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF343Q6P1L6 599 aa11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 KLHDC1Q8N7A1 406 aa11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF491Q8N8L2 437 aa11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 CHRDL1Q9BU40 450 aa11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 ATRQ13535 2644 aa11.41□□□□□ -0.58
SHKBP1-211ENST00000595945 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 OR2T8A6NH00 312 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 SEC14L6B5MCN3 397 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 TGOLN2O43493 480 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 RPLP1P05386 114 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 CLEC3BP05452 202 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 FABP1P07148 127 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 M6PRP20645 277 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 GPR183P32249 361 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 FHITP49789 147 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 PLP1P60201 277 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 GCSAMLQ5JQS6 135 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 CLEC19AQ6UXS0 136 aa11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 RPP25LQ8N5L8 163 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 PCNPQ8WW12 178 aaKnown RBP11.4□□□□□ -0.58
SHKBP1-211ENST00000595945 ZNF705EA8MWA4 302 aaPredicted RBP11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 PSG1P11464 419 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 RAB14P61106 215 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 BLOC1S1P78537 153 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 ZNF616Q08AN1 781 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 ZNF726P1Q15940 193 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 TCTEX1D4Q5JR98 221 aa11.39□□□□□ -0.59
SHKBP1-211ENST00000595945 PXDC1Q5TGL8 231 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms