RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 PRADC1Q9BSG0 188 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 SRMSQ9H3Y6 488 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 DAZ1Q9NQZ3 744 aaKnown RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 DAZ3Q9NR90 486 aaKnown RBP4.42□□□□□ -1.7
VMP1-215ENST00000592619 MED9Q9NWA0 146 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 ZNF226Q9NYT6 803 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 TMEM216Q9P0N5 145 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 XCL2Q9UBD3 114 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 NAT8Q9UHE5 227 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 PTPRBP23467 1997 aa4.42□□□□□ -1.7
VMP1-215ENST00000592619 TRAV5A0A0B4J249 113 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 IGKV1D-13A0A0B4J2D9 117 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 WI2-2373I1.2A0A1W2PRP0 233 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 KNCNA6PVL3 124 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 CRYBA1P05813 215 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 ADRA2AP08913 450 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 UCHL1P09936 223 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 IGKV1-13P0DP09 117 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 CTLA4P16410 223 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 BRS3P32247 399 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 KRTAP27-1Q3LI81 207 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 C6orf52Q5T4I8 152 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 HES3Q5TGS1 186 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 LCN8Q6JVE9 175 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 CLEC19AQ6UXS0 136 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 ZCCHC24Q8N2G6 241 aaKnown RBP4.41□□□□□ -1.7
VMP1-215ENST00000592619 EXOC3-AS1Q8N2X6 119 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 OR52R1Q8NGF1 315 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 LINC01006Q8NI28 216 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 SLAMF6Q96DU3 332 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 TSPAN32Q96QS1 320 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 TMEM147Q9BVK8 224 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 SLIRPQ9GZT3 109 aaKnown RBP4.41□□□□□ -1.7
VMP1-215ENST00000592619 TMEM100Q9NV29 134 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 PRR34Q9NV39 138 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 BOKQ9UMX3 212 aaPredicted RBP4.41□□□□□ -1.7
VMP1-215ENST00000592619 HEBP2Q9Y5Z4 205 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 SLC25A15Q9Y619 301 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 FREM2Q5SZK8 3169 aa4.41□□□□□ -1.7
VMP1-215ENST00000592619 CACNA1AO00555 2505 aa4.4□□□□□ -1.7
VMP1-215ENST00000592619 CEP250Q9BV73 2442 aa4.4□□□□□ -1.7
VMP1-215ENST00000592619 TMED7-TICAM2A0A0A6YYA0 188 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 A0A1B0GW64 132 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 J3QR89 54 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 XKRYO14609 159 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 MYL12BO14950 172 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 NDUFS5O43920 106 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 OR1I1O60431 355 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 HLA-DRB1P01911 266 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 EIF4EP06730 217 aaKnown RBP4.4□□□□□ -1.71
VMP1-215ENST00000592619 SOD3P08294 240 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 ERGP11308 486 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 CCL1P22362 96 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 ATP6V0CP27449 155 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 BTCP35070 178 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 PSMB2P49721 201 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 CTBP2P56545 445 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 EIF3IQ13347 325 aaKnown RBP4.4□□□□□ -1.71
VMP1-215ENST00000592619 MESTQ5EB52 335 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 CENPWQ5EE01 88 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 RASL11AQ6T310 242 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 ANKRD29Q8N6D5 301 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 LY6G5BQ8NDX9 201 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 OR10AD1Q8NGE0 317 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 LCN9Q8WX39 176 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 PATE1Q8WXA2 126 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 RNF185Q96GF1 192 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 SLC25A44Q96H78 314 aaPredicted RBP4.4□□□□□ -1.71
VMP1-215ENST00000592619 DERL3Q96Q80 235 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 HSD17B10Q99714 261 aaKnown RBP4.4□□□□□ -1.71
VMP1-215ENST00000592619 MRPL57Q9BQC6 102 aaKnown RBP4.4□□□□□ -1.71
VMP1-215ENST00000592619 ANAPC13Q9BS18 74 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 OR2J1Q9GZK6 312 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 TMEM133Q9H2Q1 129 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 CXorf21Q9HAI6 301 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 OR5AC2Q9NZP5 309 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 MTFP1Q9UDX5 166 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 INSIG2Q9Y5U4 225 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 SMAD5-AS1Q9Y6J3 95 aa4.4□□□□□ -1.71
VMP1-215ENST00000592619 PHF3Q92576 2039 aaKnown RBP4.39□□□□□ -1.71
VMP1-215ENST00000592619 PIKFYVEQ9Y2I7 2098 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 TMEM269A0A1B0GVZ9 245 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 PGPA6NDG6 321 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 A8MT66 165 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 C1orf196B1AJZ1 125 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 OVOL1O14753 267 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 GPX1P07203 203 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 CACNG7P62955 275 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 C16orf72Q14CZ0 275 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 Q499Y3 187 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 SBSNQ6UWP8 590 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 VN1R4Q7Z5H5 301 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 C11orf72Q8NBR9 251 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 OR10J6PQ8NGY7 276 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 PP6455Q8WZ26 134 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 SLC35E1Q96K37 410 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 SLC25A31Q9H0C2 315 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 Q9H521 79 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 PARP11Q9NR21 331 aa4.39□□□□□ -1.71
VMP1-215ENST00000592619 PTPRZ1P23471 2315 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms