RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 TMEM200BQ69YZ2 307 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 NHP2Q9NX24 153 aaKnown RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 ZFC3H1O60293 1989 aaKnown RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 IGFBP3P17936 291 aaPredicted RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 TNS1Q9HBL0 1735 aaKnown RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 F8WEM9 126 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 IGHV1-8P0DP01 117 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 RPL23P62829 140 aaKnown RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 MINOS1Q5TGZ0 78 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 MBD3L1Q8WWY6 194 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 MINOS1-NBL1R4GNA1 71 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 NTN3O00634 580 aaPredicted RBP9.3□□□□□ -0.92
RPAP1-204ENST00000562303 GATD1Q8NB37 220 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 PRDM13Q9H4Q3 707 aa9.3□□□□□ -0.92
RPAP1-204ENST00000562303 A0A1W2PRE2 83 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 SHISA3A0PJX4 238 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 C1QTNF9P0C862 333 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 CD300EQ496F6 205 aaPredicted RBP9.29□□□□□ -0.92
RPAP1-204ENST00000562303 ZNF876PQ49A33 203 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 UBE2E2Q96LR5 201 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 PLSCR4Q9NRQ2 329 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 IGHV1-3A0A0C4DH29 117 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 PAX4O43316 350 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 IGLV3-32A0A0A0MS00 114 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 H3BUT2 72 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 NPC2P61916 151 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 SRSF6Q13247 344 aaKnown RBP9.29□□□□□ -0.92
RPAP1-204ENST00000562303 TEX38Q6PEX7 206 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 FGFBP3Q8TAT2 258 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 TRAV5A0A0B4J249 113 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 HOXA3O43365 443 aaPredicted RBP9.29□□□□□ -0.92
RPAP1-204ENST00000562303 NAPSAO96009 420 aa9.29□□□□□ -0.92
RPAP1-204ENST00000562303 TMEM178BH3BS89 294 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 SERF1AO75920 110 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 IGKCP01834 107 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 C10orf55Q5SWW7 151 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 CCL1P22362 96 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 ADMP35318 185 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 NDPQ00604 133 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 EFNB3Q15768 340 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 NIT1Q86X76 327 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 LINC01356Q8N9X3 169 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 DEFB104AQ8WTQ1 72 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 C5orf30Q96GV9 206 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 C1QTNF4Q9BXJ3 329 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 NRN1Q9NPD7 142 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 RPUSD1Q9UJJ7 312 aaKnown RBP9.28□□□□□ -0.92
RPAP1-204ENST00000562303 FAM90A9PA6NNJ1 464 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 M0R2P5 195 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 TOMM40O96008 361 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 A0A1B0GV72 72 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 SELLP14151 372 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 SPSB3Q6PJ21 355 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 OSTCQ9NRP0 149 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 THSD7AQ9UPZ6 1657 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 SRRM4A7MD48 611 aaKnown RBP9.28□□□□□ -0.92
RPAP1-204ENST00000562303 FCN3O75636 299 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 SLC25A16P16260 332 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 ZNF329Q86UD4 541 aa9.28□□□□□ -0.92
RPAP1-204ENST00000562303 RGPD3A6NKT7 1758 aaPredicted RBP9.28□□□□□ -0.92
RPAP1-204ENST00000562303 IGKV1-9A0A0C4DH69 117 aa9.27□□□□□ -0.92
RPAP1-204ENST00000562303 A0A0G2JNJ9 132 aa9.27□□□□□ -0.92
RPAP1-204ENST00000562303 PMS2P5A8MQ11 134 aa9.27□□□□□ -0.92
RPAP1-204ENST00000562303 OOSP1A8MZH6 123 aa9.27□□□□□ -0.92
RPAP1-204ENST00000562303 Q9UFV3 132 aa9.27□□□□□ -0.92
RPAP1-204ENST00000562303 POLR2AP24928 1970 aaKnown RBP9.27□□□□□ -0.93
RPAP1-204ENST00000562303 UBR3Q6ZT12 1888 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 INSP01308 110 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 GTF3AQ92664 365 aaKnown RBP9.27□□□□□ -0.93
RPAP1-204ENST00000562303 A0A087WWC5 75 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 TRBV7-1A0A0A6YYK4 115 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 INS-IGF2F8WCM5 200 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 LAMTOR3Q9UHA4 124 aa9.27□□□□□ -0.93
RPAP1-204ENST00000562303 SRRM5B3KS81 715 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 LAGE3Q14657 143 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 SCN4AP35499 1836 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 PSG1P11464 419 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 HEPN1Q6WQI6 88 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 MESP1Q9BRJ9 268 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 CARHSP1Q9Y2V2 147 aaKnown RBP9.26□□□□□ -0.93
RPAP1-204ENST00000562303 TRAV8-4A0A0B4J246 113 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 LINC00587B1AMM8 73 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 FOXG1P55316 489 aaPredicted RBP9.26□□□□□ -0.93
RPAP1-204ENST00000562303 ATXN8Q156A1 80 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 SP5Q6BEB4 398 aaPredicted RBP9.26□□□□□ -0.93
RPAP1-204ENST00000562303 LAIR2Q6ISS4 152 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 DLEC1Q9Y238 1755 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 ZNF474Q6S9Z5 364 aaPredicted RBP9.26□□□□□ -0.93
RPAP1-204ENST00000562303 SCRT1Q9BWW7 348 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 MS4A6AQ9H2W1 248 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 FOXL1Q12952 345 aa9.26□□□□□ -0.93
RPAP1-204ENST00000562303 M0R1W7 72 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 GZMBP10144 247 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 RASL10AQ92737 203 aa9.25□□□□□ -0.93
RPAP1-204ENST00000562303 DERL1Q9BUN8 251 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms