RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 FNDC4Q9H6D8 234 aaPredicted RBP6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 SMIM30A4D0T7 59 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 IGKV1-17P01599 117 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 HBE1P02100 147 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 SMR3BP02814 79 aaPredicted RBP6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 PRM2P04554 102 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 EIF2B2P49770 351 aaKnown RBP6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 TIGITQ495A1 244 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 SPINK9Q5DT21 86 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 SSX7Q7RTT5 188 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 CLVS1Q8IUQ0 354 aaPredicted RBP6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 OR4A16Q8NH70 328 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 NARS2Q96I59 477 aaKnown RBP6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 SEC22AQ96IW7 307 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 MGLLQ99685 303 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 WDR12Q9GZL7 423 aaKnown RBP6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 SLC35B3Q9H1N7 401 aa6.22□□□□□ -1.41
RABGGTA-217ENST00000560521 J3QL48 77 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 IGKV1-39P01597 117 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 IGKV1D-39P04432 117 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 HNRNPCP07910 306 aaKnown RBP eCLIP6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 NKX2-1P43699 371 aaPredicted RBP6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 HOXA1P49639 335 aaPredicted RBP6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 RRN3P1Q2M238 152 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 GPR107Q5VW38 600 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 DHRS11Q6UWP2 260 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 OR5AP2Q8NGF4 316 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 OR4X1Q8NH49 305 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 BORCS5Q969J3 196 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 PPP1R14BQ96C90 147 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 CLUHP3Q96NS8 147 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 Q9H3A6 140 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 SAV1Q9H4B6 383 aaPredicted RBP6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 NRN1Q9NPD7 142 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 RABL2AQ9UBK7 228 aaPredicted RBP6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 RABL2BQ9UNT1 228 aa6.21□□□□□ -1.42
RABGGTA-217ENST00000560521 TRAV18A0A075B6X5 111 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 TRDV1A0A1B0GX56 115 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 F5H768 121 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 H3BMQ9 156 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 BUB3O43684 328 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 SCGNO76038 276 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 RNASE2P10153 161 aaKnown RBP6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 MYL9P24844 172 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 KRTAP10-1P60331 282 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 HERV-K104P61576 105 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 NEDD8Q15843 81 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 USF2Q15853 346 aaPredicted RBP6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 SIGLEC15Q6ZMC9 328 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 H2BFWTQ7Z2G1 175 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 OR4B1Q8NGF8 309 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 RNF141Q8WVD5 230 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 AP3S1Q92572 193 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 C17orf77Q96MU5 243 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 C7orf50Q9BRJ6 194 aaKnown RBP6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 PGPEP1Q9NXJ5 209 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 CCDC59Q9P031 241 aaKnown RBP6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 GOLT1BQ9Y3E0 138 aa6.2□□□□□ -1.42
RABGGTA-217ENST00000560521 MEIS3P1A6NDR6 274 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 LYRM9A8MSI8 78 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 INS-IGF2F8WCM5 200 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 GPR31O00270 319 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 DEFB130BP0DP73 79 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 DEFB130AP0DP74 79 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 PSMB9P28065 219 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 SNCAP37840 140 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 RFX2P48378 723 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 PSG9Q00887 426 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 FCN2Q15485 313 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 ZNF79Q15937 498 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 IZUMO4Q1ZYL8 232 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 TTC32Q5I0X7 151 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 C22orf42Q6IC83 251 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 FOXI2Q6ZQN5 318 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 Q6ZRN7 208 aaPredicted RBP6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 YIPF6Q96EC8 236 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 ZNF2Q9BSG1 426 aaPredicted RBP6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 FUNDC2Q9BWH2 189 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 MAGT1Q9H0U3 335 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 RHBDL2Q9NX52 303 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 DAPK2Q9UIK4 370 aa6.19□□□□□ -1.42
RABGGTA-217ENST00000560521 TRAV30A0A087WSZ9 112 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 A0A1W2PPQ1 181 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 NOTOA8MTQ0 251 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 F6UB75 175 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 CORTO00230 105 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 S100A5P33763 92 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 OPRK1P41145 380 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 RORCP51449 518 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 DHODHQ02127 395 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 CLINT1Q14677 625 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 FAM78BQ5VT40 261 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 CMTM1Q8IZ96 169 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 OR5H6Q8NGV6 325 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 Q8WTZ3 238 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 MRGPRFQ96AM1 343 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 LINC00052Q96N35 136 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 UHRF2Q96PU4 802 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 FXYD6Q9H0Q3 95 aa6.18□□□□□ -1.42
RABGGTA-217ENST00000560521 FAM212BQ9NTI7 297 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms