RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 CMTM1Q8IZ96 169 aa7.64□□□□□ -1.19
TRAF3-207ENST00000559734 OR4A16Q8NH70 328 aa7.64□□□□□ -1.19
TRAF3-207ENST00000559734 TMEM230Q96A57 120 aa7.64□□□□□ -1.19
TRAF3-207ENST00000559734 TSC22D3Q99576 134 aa7.64□□□□□ -1.19
TRAF3-207ENST00000559734 NAA50Q9GZZ1 169 aaKnown RBP7.64□□□□□ -1.19
TRAF3-207ENST00000559734 HERC1Q15751 4861 aa7.64□□□□□ -1.19
TRAF3-207ENST00000559734 FAM3BP58499 235 aaPredicted RBP7.63□□□□□ -1.19
TRAF3-207ENST00000559734 TSPAN5P62079 268 aa7.63□□□□□ -1.19
TRAF3-207ENST00000559734 ERHP84090 104 aaKnown RBP7.63□□□□□ -1.19
TRAF3-207ENST00000559734 PHLDA2Q53GA4 152 aa7.63□□□□□ -1.19
TRAF3-207ENST00000559734 LPCAT3Q6P1A2 487 aa7.63□□□□□ -1.19
TRAF3-207ENST00000559734 ZNF705AQ6ZN79 300 aaPredicted RBP7.63□□□□□ -1.19
TRAF3-207ENST00000559734 CADM3Q8N126 398 aa7.63□□□□□ -1.19
TRAF3-207ENST00000559734 ZNF114Q8NC26 417 aa7.63□□□□□ -1.19
TRAF3-207ENST00000559734 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 SMIM9A6NGZ8 99 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 ZNF705FA8MVS1 300 aaPredicted RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 FAM25AB3EWG3 89 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 FAM25CB3EWG5 89 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 FAM25GB3EWG6 89 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 H3BMM0 161 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 TMEM50AO95807 157 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 ZNF705DP0CH99 300 aaPredicted RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 ZNF705BP0CI00 300 aaPredicted RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 ZNF182P17025 639 aaPredicted RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 CRYBB3P26998 211 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 SMCPP49901 116 aaPredicted RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 DAD1P61803 113 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 SNRPD3P62318 126 aaKnown RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 PRCDQ00LT1 54 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 GPR107Q5VW38 600 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 MZT2AQ6P582 158 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 GSG1LQ6UXU4 331 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 C15orf53Q8NAA6 179 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 AP3S1Q92572 193 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 NEU1Q99519 415 aa7.62□□□□□ -1.19
TRAF3-207ENST00000559734 FAM212BQ9NTI7 297 aaPredicted RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 YTHDF2Q9Y5A9 579 aaKnown RBP7.62□□□□□ -1.19
TRAF3-207ENST00000559734 RPS10-NUDT3A0A1W2PQS6 291 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 FAM90A26D6RGX4 464 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 M0QYG6 137 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 SCGB2A1O75556 95 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 NUDT3O95989 172 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 S100GP29377 79 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 SNCAP37840 140 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 UCP3P55916 312 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 KRTAP10-2P60368 255 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 RNASE12Q5GAN4 147 aaKnown RBP7.61□□□□□ -1.19
TRAF3-207ENST00000559734 H2BFWTQ7Z2G1 175 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 TBC1D26Q86UD7 250 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 ZNRF2Q8NHG8 242 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 C7orf50Q9BRJ6 194 aaKnown RBP7.61□□□□□ -1.19
TRAF3-207ENST00000559734 EXTL2Q9UBQ6 330 aa7.61□□□□□ -1.19
TRAF3-207ENST00000559734 LOC102723971A0A1B0GUV8 181 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 EREGO14944 169 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 HBE1P02100 147 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 HLA-DRB4P13762 266 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 OPRK1P41145 380 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 ALDH3B2P48448 385 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 DEFB1P60022 68 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 TIGITQ495A1 244 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 RNASE10Q5GAN6 216 aaKnown RBP7.6□□□□□ -1.19
TRAF3-207ENST00000559734 SLC35G3Q8N808 338 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 OR52I2Q8NH67 350 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 GLMPQ8WWB7 406 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 ABHD1Q96SE0 405 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 MRPS26Q9BYN8 205 aaKnown RBP7.6□□□□□ -1.19
TRAF3-207ENST00000559734 MRPL36Q9P0J6 103 aaKnown RBP7.6□□□□□ -1.19
TRAF3-207ENST00000559734 KLK11Q9UBX7 282 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 GOLT1BQ9Y3E0 138 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 HLA-DRB4X5D2U9 266 aa7.6□□□□□ -1.19
TRAF3-207ENST00000559734 DMBT1Q9UGM3 2413 aaPredicted RBP7.59□□□□□ -1.19
TRAF3-207ENST00000559734 CLN5O75503 358 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 IGKV1-39P01597 117 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 IGKV1D-39P04432 117 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 HNRNPCP07910 306 aaKnown RBP eCLIP7.59□□□□□ -1.19
TRAF3-207ENST00000559734 AP2S1P53680 142 aaPredicted RBP7.59□□□□□ -1.19
TRAF3-207ENST00000559734 CCL18P55774 89 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 HSPE1P61604 102 aaKnown RBP7.59□□□□□ -1.19
TRAF3-207ENST00000559734 DLK1P80370 383 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 OXA1LQ15070 435 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 IZUMO4Q1ZYL8 232 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 GDF5OSQ5U4N7 250 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 C16orf54Q6UWD8 224 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 GPR141Q7Z602 305 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 LHFPL1Q86WI0 220 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 ARRDC1Q8N5I2 433 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 OR4B1Q8NGF8 309 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 MRGPRFQ96AM1 343 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 SEC22AQ96IW7 307 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 MTFP1Q9UDX5 166 aa7.59□□□□□ -1.19
TRAF3-207ENST00000559734 CD3DP04234 171 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 PGAM2P15259 253 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 PI3P19957 117 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 TBPP20226 339 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 HOXA1P49639 335 aaPredicted RBP7.58□□□□□ -1.2
TRAF3-207ENST00000559734 RND3P61587 244 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 SPCS2Q15005 226 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 MLANAQ16655 118 aa7.58□□□□□ -1.2
TRAF3-207ENST00000559734 RRN3P1Q2M238 152 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms