RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 U3KQE9 123 aa12.6□□□□□ -0.39
TSPAN3-204ENST00000558394 LOC102723971A0A1B0GUV8 181 aa12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 RPS10-NUDT3A0A1W2PQS6 291 aa12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 RNASE2P10153 161 aaKnown RBP12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 SDC2P34741 201 aa12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 MLANAQ16655 118 aa12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 SIGLEC15Q6ZMC9 328 aa12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 FNDC4Q9H6D8 234 aaPredicted RBP12.59□□□□□ -0.39
TSPAN3-204ENST00000558394 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 EPM2AB3EWF7 344 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 INS-IGF2F8WCM5 200 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 GSTZ1O43708 216 aaPredicted RBP12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 IGKV1-39P01597 117 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 IGKV1-17P01599 117 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 IGKV1D-39P04432 117 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 PSMB9P28065 219 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 RPL5P46777 297 aaKnown RBP12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 AKR1C2P52895 323 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 CCL18P55774 89 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 IZUMO4Q1ZYL8 232 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 RRN3P1Q2M238 152 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 OR4B1Q8NGF8 309 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 OR1S2Q8NGQ3 325 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 LINC00052Q96N35 136 aa12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 DMBT1Q9UGM3 2413 aaPredicted RBP12.58□□□□□ -0.4
TSPAN3-204ENST00000558394 TAS2R20P59543 309 aa12.57□□□□□ -0.4
TSPAN3-204ENST00000558394 GABARAPL2P60520 117 aa12.57□□□□□ -0.4
TSPAN3-204ENST00000558394 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
TSPAN3-204ENST00000558394 S100A16Q96FQ6 103 aaKnown RBP12.57□□□□□ -0.4
TSPAN3-204ENST00000558394 ATG12O94817 140 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 NUDT3O95989 172 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 HRH1P35367 487 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 ID1P41134 155 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 ETV6P41212 452 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 GDF5OSQ5U4N7 250 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 TMEM208Q9BTX3 173 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 MAGT1Q9H0U3 335 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 SAV1Q9H4B6 383 aaPredicted RBP12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 DNAH5Q8TE73 4624 aa12.56□□□□□ -0.4
TSPAN3-204ENST00000558394 IL4P05112 153 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 CLEC2LP0C7M8 214 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 OR10J1P30954 320 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 YPEL3P61236 119 aaPredicted RBP12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 DHODHQ02127 395 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 TMEM69Q5SWH9 247 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 FOXI2Q6ZQN5 318 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 COQ8AQ8NI60 647 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 RAB26Q9ULW5 256 aa12.55□□□□□ -0.4
TSPAN3-204ENST00000558394 IGLC1P0CG04 106 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 INAFM2P0DMQ5 153 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 NAT1P18440 290 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 HLA-DMAP28067 261 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 RND2P52198 227 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 PSG9Q00887 426 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 SCPEP1Q9HB40 452 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 PFDN2Q9UHV9 154 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 ANAPC10Q9UM13 185 aa12.54□□□□□ -0.4
TSPAN3-204ENST00000558394 A0A0B4J293 547 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 BUB3O43684 328 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 SLC25A4P12235 298 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 NUP62P37198 522 aaPredicted RBP12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 DEFB1P60022 68 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 USF2Q15853 346 aaPredicted RBP12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 SPATA31B1PQ5VZV4 182 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 EBLN2Q6P2I7 272 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 ZNF709Q8N972 641 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 RNASE11Q8TAA1 199 aaKnown RBP12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 CLUHP3Q96NS8 147 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 SLC35B3Q9H1N7 401 aa12.53□□□□□ -0.4
TSPAN3-204ENST00000558394 F5H768 121 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 M0QYG6 137 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 IGKV1-5P01602 117 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 PGAM2P15259 253 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 PRSS3P35030 304 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 HTR2BP41595 481 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 RORCP51449 518 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 CLINT1Q14677 625 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 C1orf158Q8N1D5 194 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 FCGR1BQ92637 280 aa12.52□□□□□ -0.41
TSPAN3-204ENST00000558394 LOC100506127A0A0U1RQW1 187 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 TMEM127O75204 238 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 RD3LP0DJH9 198 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 UCP3P55916 312 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 TTC32Q5I0X7 151 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 PRSS54Q6PEW0 395 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 SPARTQ8N0X7 666 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 RRNAD1Q96FB5 475 aaKnown RBP12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 KLK11Q9UBX7 282 aa12.51□□□□□ -0.41
TSPAN3-204ENST00000558394 LYRM9A8MSI8 78 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 DEFB130BP0DP73 79 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 DEFB130AP0DP74 79 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 PSMB3P49720 205 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 TRIM16LQ309B1 348 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 UBE2NLQ5JXB2 153 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 ETFRF1Q6IPR1 90 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 LYSMD2Q8IV50 215 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 LINC00588Q9Y4M8 146 aa12.5□□□□□ -0.41
TSPAN3-204ENST00000558394 TOMM40O96008 361 aa12.49□□□□□ -0.41
TSPAN3-204ENST00000558394 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms