RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 TRGV9Q99603 122 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 C21orf62Q9NYP8 219 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 SLC45A2Q9UMX9 530 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 PXMP4Q9Y6I8 212 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 IGKV1D-37A0A075B6S9 117 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 TCRBV4S1A1TA0A5B7 111 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 MFSD2BA6NFX1 497 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 TSPAN15O95858 294 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 C15orf32Q32M92 178 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 FFAR4Q5NUL3 377 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 TXN2Q99757 166 aa18.51■□□□□ 0.55
SIX4-203ENST00000556952 TMEM89A2RUT3 159 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 ZNF705EA8MWA4 302 aaPredicted RBP18.5■□□□□ 0.55
SIX4-203ENST00000556952 SELENOTP62341 195 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 PRR20EP86478 221 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 PRR20CP86479 221 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 PRR20DP86480 221 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 PRR20BP86481 221 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 PRR20AP86496 221 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 TMEM41BQ5BJD5 291 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 CYP2G1PQ6ZSU1 146 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 STPG3Q8N7X2 389 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 TMEM158Q8WZ71 300 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 MS4A10Q96PG2 267 aa18.5■□□□□ 0.55
SIX4-203ENST00000556952 TRAV30A0A087WSZ9 112 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 IGHG4P01861 327 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 TRGV3P03979 118 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 ELLP55199 621 aaPredicted RBP18.49■□□□□ 0.55
SIX4-203ENST00000556952 B2MP61769 119 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 SLC35B1P78383 322 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 MIC13Q5XKP0 118 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 C19orf24Q9BVV8 132 aa18.49■□□□□ 0.55
SIX4-203ENST00000556952 SCGB2A1O75556 95 aa18.48■□□□□ 0.55
SIX4-203ENST00000556952 IGLC1P0CG04 106 aa18.48■□□□□ 0.55
SIX4-203ENST00000556952 BLOC1S1P78537 153 aa18.48■□□□□ 0.55
SIX4-203ENST00000556952 ACOT6Q3I5F7 207 aaPredicted RBP18.48■□□□□ 0.55
SIX4-203ENST00000556952 EEF1AKMT3Q96AZ1 226 aa18.48■□□□□ 0.55
SIX4-203ENST00000556952 ATP6V0BQ99437 205 aa18.48■□□□□ 0.55
SIX4-203ENST00000556952 SLC39A9Q9NUM3 307 aa18.48■□□□□ 0.55
SIX4-203ENST00000556952 GNG7O60262 68 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 CRYBA1P05813 215 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 M6PRP20645 277 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 TPPP2P59282 170 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 DEFA5Q01523 94 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 BPIFCQ8NFQ6 507 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 ZNF502Q8TBZ5 544 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 USMG5Q96IX5 58 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 GAR1Q9NY12 217 aaKnown RBP18.47■□□□□ 0.55
SIX4-203ENST00000556952 DNHD1Q96M86 4753 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 TRBV7-1A0A0A6YYK4 115 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 F8W735 103 aaPredicted RBP18.47■□□□□ 0.55
SIX4-203ENST00000556952 FABP1P07148 127 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 PF4V1P10720 104 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 ATP5G2Q06055 141 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 Q56UQ5 140 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 Q6ZRG5 221 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 Q6ZSV7 163 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 FAM213BQ8TBF2 198 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 PCNPQ8WW12 178 aaKnown RBP18.47■□□□□ 0.55
SIX4-203ENST00000556952 RPRMQ9NS64 109 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 SERTAD4Q9NUC0 356 aa18.47■□□□□ 0.55
SIX4-203ENST00000556952 LINC00869P0C866 280 aa18.46■□□□□ 0.55
SIX4-203ENST00000556952 ZNF90Q03938 601 aa18.46■□□□□ 0.55
SIX4-203ENST00000556952 VSIRQ9H7M9 311 aa18.46■□□□□ 0.55
SIX4-203ENST00000556952 S4R3C0 116 aa18.46■□□□□ 0.55
SIX4-203ENST00000556952 TENM1Q9UKZ4 2725 aa18.45■□□□□ 0.54
SIX4-203ENST00000556952 PSMB11A5LHX3 300 aa18.45■□□□□ 0.54
SIX4-203ENST00000556952 YIF1AO95070 293 aa18.45■□□□□ 0.54
SIX4-203ENST00000556952 PSMB8P28062 276 aa18.45■□□□□ 0.54
SIX4-203ENST00000556952 RAB2AP61019 212 aa18.45■□□□□ 0.54
SIX4-203ENST00000556952 A0A0G2JLM5 398 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 FHITP49789 147 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 RAB9AP51151 201 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 TEX38Q6PEX7 206 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 ZNF329Q86UD4 541 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 OR10G4Q8NGN3 311 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 OR10G9Q8NGN4 311 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 OR10G7Q8NGN6 311 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 STAB1Q9NY15 2570 aa18.44■□□□□ 0.54
SIX4-203ENST00000556952 IGKV1-17P01599 117 aa18.43■□□□□ 0.54
SIX4-203ENST00000556952 ELANEP08246 267 aa18.43■□□□□ 0.54
SIX4-203ENST00000556952 ZNF616Q08AN1 781 aa18.43■□□□□ 0.54
SIX4-203ENST00000556952 FOXE3Q13461 319 aa18.43■□□□□ 0.54
SIX4-203ENST00000556952 PXDC1Q5TGL8 231 aa18.43■□□□□ 0.54
SIX4-203ENST00000556952 IGHV3-23P01764 117 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 GATA2P23769 480 aaPredicted RBP18.42■□□□□ 0.54
SIX4-203ENST00000556952 YPEL3P61236 119 aaPredicted RBP18.42■□□□□ 0.54
SIX4-203ENST00000556952 NDUFA5Q16718 116 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 TIGITQ495A1 244 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 COMMD1Q8N668 190 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 CCDC140Q96MF4 163 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 KLK15Q9H2R5 256 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 RPP25LQ8N5L8 163 aaKnown RBP18.42■□□□□ 0.54
SIX4-203ENST00000556952 RCC1LQ96I51 464 aaKnown RBP18.42■□□□□ 0.54
SIX4-203ENST00000556952 C16orf95Q9H693 158 aa18.42■□□□□ 0.54
SIX4-203ENST00000556952 OR2T8A6NH00 312 aa18.41■□□□□ 0.54
SIX4-203ENST00000556952 TOMM40O96008 361 aa18.41■□□□□ 0.54
SIX4-203ENST00000556952 RNF152Q8N8N0 203 aa18.41■□□□□ 0.54
SIX4-203ENST00000556952 ACTR3CQ9C0K3 210 aaPredicted RBP18.41■□□□□ 0.54
SIX4-203ENST00000556952 SEC14L6B5MCN3 397 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms