RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 MED31Q9Y3C7 131 aa2.43□□□□□ -2.02
VRK1-205ENST00000555402 SOGA1O94964 1423 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 NCAPD3P42695 1498 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 TMEM189A5PLL7 270 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 ZNF860A6NHJ4 632 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 FNDC10F2Z333 226 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 H3BPC8 53 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 TAX1BP3O14907 124 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 IGHV1-69P01742 117 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 TRGC2P03986 189 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 GZMBP10144 247 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 NFYBP25208 207 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 HLA-DMBP28068 263 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 RBM11P57052 281 aaKnown RBP2.42□□□□□ -2.02
VRK1-205ENST00000555402 HIST1H4AP62805 103 aaKnown RBP2.42□□□□□ -2.02
VRK1-205ENST00000555402 RRN3P1Q2M238 152 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 SPANXN3Q5MJ09 141 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 RPL13AP3Q6NVV1 102 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 ZNF767PQ75MW2 155 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 BORCS8Q96FH0 119 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 GPX7Q96SL4 187 aaPredicted RBP2.42□□□□□ -2.02
VRK1-205ENST00000555402 VPS25Q9BRG1 176 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 RTL8AQ9BWD3 113 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 CACYBPQ9HB71 228 aaKnown RBP2.42□□□□□ -2.02
VRK1-205ENST00000555402 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 CKLFQ9UBR5 152 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 HSPB8Q9UJY1 196 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 LAMTOR2Q9Y2Q5 125 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 DENND4CQ5VZ89 1909 aa2.42□□□□□ -2.02
VRK1-205ENST00000555402 LTBP2Q14767 1821 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 TRGV4A0A0C4DH28 118 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 TLCD2A6NGC4 264 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 GABARAPH6UMI1 98 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 H7BYZ3 331 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 TXNDC9O14530 226 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 DBIP07108 87 aaKnown RBP2.41□□□□□ -2.02
VRK1-205ENST00000555402 BCL2P10415 239 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 S100A11P31949 105 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 RPS28P62857 69 aaKnown RBP2.41□□□□□ -2.02
VRK1-205ENST00000555402 BCL2L15Q5TBC7 163 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 OR8I2Q8N0Y5 310 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 C10orf126Q8N4M7 172 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 CLDND2Q8NHS1 167 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 ISOC1Q96CN7 298 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 SLAMF6Q96DU3 332 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 SLC25A21Q9BQT8 299 aaPredicted RBP2.41□□□□□ -2.02
VRK1-205ENST00000555402 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 TOPBP1Q92547 1522 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 OVOS2A0A0G2JMS6 1433 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 BCL9O00512 1426 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 TRPM6Q9BX84 2022 aa2.41□□□□□ -2.02
VRK1-205ENST00000555402 SMARCA2P51531 1590 aa2.4□□□□□ -2.02
VRK1-205ENST00000555402 TMEM235A6NFC5 223 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 C11orf86A6NJI1 115 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 FABP5P3A8MUU1 101 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 C5orf58C9J3I9 102 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 NPYP01303 97 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 IGHV3-7P01780 117 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 UBBP0CG47 229 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 PSMB8P28062 276 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 CMPK1P30085 196 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 SDC4P31431 198 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 CCR2P41597 374 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 INSL3P51460 131 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 FXYD7P58549 80 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 YPEL3P61236 119 aaPredicted RBP2.4□□□□□ -2.03
VRK1-205ENST00000555402 AKR1C1Q04828 323 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 RPL18Q07020 188 aaKnown RBP2.4□□□□□ -2.03
VRK1-205ENST00000555402 RTL8BQ17RB0 113 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 LINC01554Q52M75 96 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.4□□□□□ -2.03
VRK1-205ENST00000555402 TRAPPC6BQ86SZ2 158 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 PRR15Q8IV56 129 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 IFT20Q8IY31 132 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 OR52R1Q8NGF1 315 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 DCANP1Q8TF63 244 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 ZCCHC13Q8WW36 166 aaKnown RBP2.4□□□□□ -2.03
VRK1-205ENST00000555402 CARD19Q96LW7 228 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 OR8D2Q9GZM6 311 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 PIK3C2AO00443 1686 aa2.4□□□□□ -2.03
VRK1-205ENST00000555402 ANKRD31Q8N7Z5 1873 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 NUP210Q8TEM1 1887 aaPredicted RBP2.39□□□□□ -2.03
VRK1-205ENST00000555402 IGKV1-9A0A0C4DH69 117 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 IRGMA1A4Y4 181 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 TMEM212A6NML5 194 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 TMEM256-PLSCR3K7ERE1 68 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 OR2T1O43869 369 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 GGCTO75223 188 aaKnown RBP2.39□□□□□ -2.03
VRK1-205ENST00000555402 C1QAP02745 245 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 C1QCP02747 245 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 S100A1P23297 94 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 SRP14P37108 136 aaKnown RBP2.39□□□□□ -2.03
VRK1-205ENST00000555402 RHOGP84095 191 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 PLCXD2Q0VAA5 305 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 ZNF705AQ6ZN79 300 aaPredicted RBP2.39□□□□□ -2.03
VRK1-205ENST00000555402 BPIFA4PQ86YQ2 179 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 KRTAP13-1Q8IUC0 172 aa2.39□□□□□ -2.03
VRK1-205ENST00000555402 RPP25LQ8N5L8 163 aaKnown RBP2.39□□□□□ -2.03
VRK1-205ENST00000555402 TMEM229BQ8NBD8 167 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms