RNA–Protein interactions for RNA: ENST00000552085.1

SNRPF-204, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 3 BASIC

Gene SNRPF, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-204ENST00000552085 HERV-K104P61576 105 aa8.56□□□□□ -1.04
SNRPF-204ENST00000552085 ERHP84090 104 aaKnown RBP8.56□□□□□ -1.04
SNRPF-204ENST00000552085 PSMG4Q5JS54 123 aa8.56□□□□□ -1.04
SNRPF-204ENST00000552085 CMTM1Q8IZ96 169 aa8.56□□□□□ -1.04
SNRPF-204ENST00000552085 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
SNRPF-204ENST00000552085 MAGT1Q9H0U3 335 aa8.56□□□□□ -1.04
SNRPF-204ENST00000552085 A0A0A6YYH2 397 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 A6NJ64 397 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 CORTO00230 105 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 HBE1P02100 147 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 ASIPP42127 132 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 CBX5P45973 191 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 HOXA1P49639 335 aaPredicted RBP8.55□□□□□ -1.04
SNRPF-204ENST00000552085 SCAND1P57086 179 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 HSPE1P61604 102 aaKnown RBP8.55□□□□□ -1.04
SNRPF-204ENST00000552085 SNRPD3P62318 126 aaKnown RBP8.55□□□□□ -1.04
SNRPF-204ENST00000552085 DHRS2Q13268 280 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 OR4A16Q8NH70 328 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 UHRF2Q96PU4 802 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 VCXQ9H320 206 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 RHBDL2Q9NX52 303 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 U3KQE9 123 aa8.55□□□□□ -1.04
SNRPF-204ENST00000552085 FAT3Q8TDW7 4589 aa8.54□□□□□ -1.04
SNRPF-204ENST00000552085 INS-IGF2F8WCM5 200 aa8.54□□□□□ -1.04
SNRPF-204ENST00000552085 SCGB2A1O75556 95 aa8.54□□□□□ -1.04
SNRPF-204ENST00000552085 TRAV18A0A075B6X5 111 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 CLN5O75503 358 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 HLA-DRB4P13762 266 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 SNCAP37840 140 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 FXYD7P58549 80 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 TBCEQ15813 527 aaPredicted RBP8.53□□□□□ -1.04
SNRPF-204ENST00000552085 RRN3P1Q2M238 152 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 C22orf42Q6IC83 251 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 H2BFWTQ7Z2G1 175 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 OR4X1Q8NH49 305 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 LGALS14Q8TCE9 139 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 TMEM230Q96A57 120 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 RNF125Q96EQ8 232 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 SEC22AQ96IW7 307 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 CLUHP3Q96NS8 147 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 HLA-DRB4X5D2U9 266 aa8.53□□□□□ -1.04
SNRPF-204ENST00000552085 FAM90A26D6RGX4 464 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 GPR31O00270 319 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 PPP5CP53041 499 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 SUB1P53999 127 aaKnown RBP eCLIP8.52□□□□□ -1.052e-17■■■■■ 86.5
SNRPF-204ENST00000552085 C16orf54Q6UWD8 224 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 GLMPQ8WWB7 406 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 ZNF2Q9BSG1 426 aaPredicted RBP8.52□□□□□ -1.05
SNRPF-204ENST00000552085 AUNIPQ9H7T9 357 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 EHFQ9NZC4 300 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 MRPS16Q9Y3D3 137 aaKnown RBP8.52□□□□□ -1.05
SNRPF-204ENST00000552085 GOLT1BQ9Y3E0 138 aa8.52□□□□□ -1.05
SNRPF-204ENST00000552085 TRAV30A0A087WSZ9 112 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 SMIM30A4D0T7 59 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 LYRM9A8MSI8 78 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 ATP5G1P05496 136 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 DEFB130BP0DP73 79 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 DEFB130AP0DP74 79 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 NKX2-1P43699 371 aaPredicted RBP8.51□□□□□ -1.05
SNRPF-204ENST00000552085 RPL5P46777 297 aaKnown RBP8.51□□□□□ -1.05
SNRPF-204ENST00000552085 ATP5G3P48201 142 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 ESRGQ1W209 222 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 SFXN4Q6P4A7 337 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 C7orf50Q9BRJ6 194 aaKnown RBP8.51□□□□□ -1.05
SNRPF-204ENST00000552085 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 FAM30AQ9NZY2 134 aa8.51□□□□□ -1.05
SNRPF-204ENST00000552085 IGKV1-17P01599 117 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 HNRNPCP07910 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
SNRPF-204ENST00000552085 S100GP29377 79 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 LPCAT3Q6P1A2 487 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 SLC25A38Q96DW6 304 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 DIABLOQ9NR28 239 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 RRP15Q9Y3B9 282 aaKnown RBP8.5□□□□□ -1.05
SNRPF-204ENST00000552085 TNFRSF18Q9Y5U5 241 aa8.5□□□□□ -1.05
SNRPF-204ENST00000552085 IGKV1-39P01597 117 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 IGKV3-20P01619 116 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 IGKV1D-39P04432 117 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 FCER2P06734 321 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 RFX2P48378 723 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 OR6F1Q8NGZ6 308 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 TXNL4BQ9NX01 149 aaKnown RBP8.49□□□□□ -1.05
SNRPF-204ENST00000552085 MRPL36Q9P0J6 103 aaKnown RBP8.49□□□□□ -1.05
SNRPF-204ENST00000552085 ANAPC10Q9UM13 185 aa8.49□□□□□ -1.05
SNRPF-204ENST00000552085 IGLV5-52A0A0A0MRZ9 124 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 BUB3O43684 328 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 RNASE2P10153 161 aaKnown RBP8.48□□□□□ -1.05
SNRPF-204ENST00000552085 NAT1P18440 290 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 OPRK1P41145 380 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 TAS2R46P59540 309 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 YPEL3P61236 119 aaPredicted RBP8.48□□□□□ -1.05
SNRPF-204ENST00000552085 C4orf48Q5BLP8 95 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 SPATA31B1PQ5VZV4 182 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 NFE4Q86UQ8 179 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 ZNF709Q8N972 641 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 OR5H6Q8NGV6 325 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 Q8WTZ3 238 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 FXYD6Q9H0Q3 95 aa8.48□□□□□ -1.05
SNRPF-204ENST00000552085 SAV1Q9H4B6 383 aaPredicted RBP8.48□□□□□ -1.05
SNRPF-204ENST00000552085 IFT46Q9NQC8 304 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms