RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 ZNHIT1O43257 154 aa7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 STAG3L3P0CL85 134 aa7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 RNF126Q9BV68 326 aa7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 NXT2Q9NPJ8 142 aaKnown RBP7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 C1QTNF9P0C862 333 aa7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 MIR17HGQ75NE6 70 aa7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 BPESC1Q9GZL8 116 aa7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 PEF1Q9UBV8 284 aaKnown RBP7.57□□□□□ -1.2
PPFIA2-216ENST00000549396 IGHV2-70P01814 119 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 UQCRFS1P47985 274 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 PSMB2P49721 201 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 ORMDL2Q53FV1 153 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 ORMDL3Q8N138 153 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 ELANEP08246 267 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 PRELID3AQ96N28 172 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 PSG8Q9UQ74 426 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 COL8A2P25067 703 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 ZNF415Q09FC8 603 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 LCN12Q6JVE5 192 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 ATP6V0BQ99437 205 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 TRIOBPQ9H2D6 2365 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 RALGAPA1Q6GYQ0 2036 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 C15orf32Q32M92 178 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 PLA2G5P39877 138 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 ZNF841Q6ZN19 808 aa7.56□□□□□ -1.2
PPFIA2-216ENST00000549396 LINC00587B1AMM8 73 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 RAMP3O60896 148 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 ZNF324O75467 553 aaPredicted RBP7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 KRTAP27-1Q3LI81 207 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 REC114Q7Z4M0 266 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 CBLN2Q8IUK8 224 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 PRADC1Q9BSG0 188 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 IGHV3OR16-12A0A075B7B8 117 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 POU2AF1Q16633 256 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 RAB37Q96AX2 223 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 DAZ1Q9NQZ3 744 aaKnown RBP7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 LYNX1G3V0Z9 82 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 C1QL1O75973 258 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 WISP1O95388 367 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 PRSS2P07478 247 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 LYNX1P0DP58 116 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 VOPP1Q96AW1 172 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 DMRTA2Q96SC8 542 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 AGMATQ9BSE5 352 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 SAA4P35542 130 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 ST20Q9HBF5 79 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 SEC16AO15027 2179 aa7.55□□□□□ -1.2
PPFIA2-216ENST00000549396 OR5AN1Q8NGI8 311 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 INSP01308 110 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 SRSF6Q13247 344 aaKnown RBP7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 ISOC2Q96AB3 205 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 SMPXQ9UHP9 88 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 A8MXK9 166 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 SCO1O75880 301 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 GPHA2Q96T91 129 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 TRGV2A0A075B6R0 118 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 SEC11AP67812 179 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 SRSF2Q01130 221 aaKnown RBP7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 BIVMQ86UB2 503 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 RARRES2Q99969 163 aa7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 SLC25A39Q9BZJ4 359 aaPredicted RBP7.54□□□□□ -1.2
PPFIA2-216ENST00000549396 C5orf52A6NGY3 159 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 CD33P20138 364 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 ZNF138P52744 262 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 LRRC75A-AS1Q8N1F1 130 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 UQCR10Q9UDW1 63 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 COL4A4P53420 1690 aaPredicted RBP7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 TMEM89A2RUT3 159 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 LINC01619G3V211 115 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 SRIP30626 198 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 RNASE4P34096 147 aaKnown RBP7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 TMEM136Q6ZRR5 245 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 TSKUQ8WUA8 353 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 CHCHD1Q96BP2 118 aaKnown RBP7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 CGB1A6NKQ9 187 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 OR11H12B2RN74 326 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 OR10J3Q5JRS4 329 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 PIP4P2Q8N4L2 257 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 NEUROG1Q92886 237 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 NDUFA4O00483 81 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 FSTL3O95633 263 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 IGHV3-11P01762 117 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 GNB1LQ9BYB4 327 aa7.53□□□□□ -1.2
PPFIA2-216ENST00000549396 SCO2A0A1W2PP80 73 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 IGKV1-5P01602 117 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 RNASE2P10153 161 aaKnown RBP7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 LOXP28300 417 aaPredicted RBP7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 CDX1P47902 265 aaPredicted RBP7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 HINT1P49773 126 aaPredicted RBP7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 TMEM183AQ8IXX5 376 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 OR4C5Q8NGB2 326 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 GFRA4Q9GZZ7 299 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 NRN1Q9NPD7 142 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 TMEM14BQ9NUH8 114 aa7.52□□□□□ -1.2
PPFIA2-216ENST00000549396 IGKV1D-8A0A087WSZ0 117 aa7.52□□□□□ -1.21
PPFIA2-216ENST00000549396 SRSF1Q07955 248 aaKnown RBP eCLIP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms