RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 IFT46Q9NQC8 304 aa9.49□□□□□ -0.89
CCDC59-202ENST00000547758 FAM212BQ9NTI7 297 aaPredicted RBP9.49□□□□□ -0.89
CCDC59-202ENST00000547758 TXNL4BQ9NX01 149 aaKnown RBP9.49□□□□□ -0.89
CCDC59-202ENST00000547758 IGKV1-39P01597 117 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 IGKV1-17P01599 117 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 IGKV1D-39P04432 117 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 HNRNPCP07910 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
CCDC59-202ENST00000547758 OPRK1P41145 380 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 DAD1P61803 113 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 TIGITQ495A1 244 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 PHLDA2Q53GA4 152 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 SLC35G3Q8N808 338 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 MRGPRFQ96AM1 343 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 FNDC4Q9H6D8 234 aaPredicted RBP9.48□□□□□ -0.89
CCDC59-202ENST00000547758 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
CCDC59-202ENST00000547758 YTHDF2Q9Y5A9 579 aaKnown RBP9.48□□□□□ -0.89
CCDC59-202ENST00000547758 VPS13BQ7Z7G8 4022 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 LOC102723971A0A1B0GUV8 181 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 INS-IGF2F8WCM5 200 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 IGKV3-20P01619 116 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 PMP2P02689 132 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 INAFM2P0DMQ5 153 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 RNASE2P10153 161 aaKnown RBP9.47□□□□□ -0.89
CCDC59-202ENST00000547758 NKX2-1P43699 371 aaPredicted RBP9.47□□□□□ -0.89
CCDC59-202ENST00000547758 SUB1P53999 127 aaKnown RBP eCLIP9.47□□□□□ -0.89
CCDC59-202ENST00000547758 SCAND1P57086 179 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 GDF5OSQ5U4N7 250 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 GSG1LQ6UXU4 331 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 DIABLOQ9NR28 239 aa9.47□□□□□ -0.89
CCDC59-202ENST00000547758 TRAV30A0A087WSZ9 112 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 HBE1P02100 147 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 S100GP29377 79 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 HOXA1P49639 335 aaPredicted RBP9.46□□□□□ -0.9
CCDC59-202ENST00000547758 AQP4P55087 323 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 KRTAP10-2P60368 255 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 MLANAQ16655 118 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 IZUMO4Q1ZYL8 232 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 TBC1D26Q86UD7 250 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 ZNF709Q8N972 641 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 OR5H2Q8NGV7 314 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 GOLT1BQ9Y3E0 138 aa9.46□□□□□ -0.9
CCDC59-202ENST00000547758 FLG2Q5D862 2391 aaPredicted RBP9.46□□□□□ -0.9
CCDC59-202ENST00000547758 RPL5P46777 297 aaKnown RBP9.45□□□□□ -0.9
CCDC59-202ENST00000547758 TAS2R46P59540 309 aa9.45□□□□□ -0.9
CCDC59-202ENST00000547758 DEFB1P60022 68 aa9.45□□□□□ -0.9
CCDC59-202ENST00000547758 SIGLEC15Q6ZMC9 328 aa9.45□□□□□ -0.9
CCDC59-202ENST00000547758 OR6F1Q8NGZ6 308 aa9.45□□□□□ -0.9
CCDC59-202ENST00000547758 C7orf50Q9BRJ6 194 aaKnown RBP9.45□□□□□ -0.9
CCDC59-202ENST00000547758 SAV1Q9H4B6 383 aaPredicted RBP9.45□□□□□ -0.9
CCDC59-202ENST00000547758 ANAPC10Q9UM13 185 aa9.45□□□□□ -0.9
CCDC59-202ENST00000547758 IGLC1P0CG04 106 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 SDC2P34741 201 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 ALDH3B2P48448 385 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 MXD1Q05195 221 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 USF2Q15853 346 aaPredicted RBP9.44□□□□□ -0.9
CCDC59-202ENST00000547758 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 IDNKQ5T6J7 187 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 C1orf158Q8N1D5 194 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 OR1S2Q8NGQ3 325 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 Q8WTZ3 238 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 CLUHP3Q96NS8 147 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 SLC35B3Q9H1N7 401 aa9.44□□□□□ -0.9
CCDC59-202ENST00000547758 A0A0B4J293 547 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 RPS10-NUDT3A0A1W2PQS6 291 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 BUB3O43684 328 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 NUDT3O95989 172 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 IL4P05112 153 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 CLEC2LP0C7M8 214 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 CCL18P55774 89 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 DHODHQ02127 395 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 LPCAT3Q6P1A2 487 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 FOXI2Q6ZQN5 318 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 OR4B1Q8NGF8 309 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 PDCD10Q9BUL8 212 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 BLOC1S6Q9UL45 172 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 SSR3Q9UNL2 185 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 LINC00588Q9Y4M8 146 aa9.43□□□□□ -0.9
CCDC59-202ENST00000547758 EBAG9O00559 213 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 GSTZ1O43708 216 aaPredicted RBP9.42□□□□□ -0.9
CCDC59-202ENST00000547758 IGKV1-5P01602 117 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 NAT1P18440 290 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 OR10J1P30954 320 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 HRH1P35367 487 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 ETV6P41212 452 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 TAS2R20P59543 309 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 YPEL3P61236 119 aaPredicted RBP9.42□□□□□ -0.9
CCDC59-202ENST00000547758 BSXQ3C1V8 233 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 LINC00052Q96N35 136 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 SCPEP1Q9HB40 452 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 ENY2Q9NPA8 101 aa9.42□□□□□ -0.9
CCDC59-202ENST00000547758 P0C879 139 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 BTF3P20290 206 aaKnown RBP9.41□□□□□ -0.9
CCDC59-202ENST00000547758 PSMB9P28065 219 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 RORCP51449 518 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 RND2P52198 227 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 AKR1C2P52895 323 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 PSG9Q00887 426 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 ZNF79Q15937 498 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 PRSS54Q6PEW0 395 aa9.41□□□□□ -0.9
CCDC59-202ENST00000547758 MAGT1Q9H0U3 335 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms